RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 ZNF57Q68EA5 555 aaPredicted RBP10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 TYW3Q6IPR3 259 aaKnown RBP10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 RASSF6Q6ZTQ3 369 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 C6orf120Q7Z4R8 191 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 LUZP2Q86TE4 346 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 KIF18BQ86Y91 864 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 MARCH9Q86YJ5 346 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 SLC38A6Q8IZM9 456 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 ZNF680Q8NEM1 530 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 LRRC20Q8TCA0 184 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 ZNF480Q8WV37 535 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 GATAD2BQ8WXI9 593 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 SMPDL3AQ92484 453 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 RFT1Q96AA3 541 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 SORCS2Q96PQ0 1159 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 NRTNQ99748 197 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 CCDC3Q9BQI4 270 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 ABCG4Q9H172 646 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 OR51B5Q9H339 312 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 GALNT9Q9HCQ5 603 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 POT1Q9NUX5 634 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 RABL2AQ9UBK7 228 aaPredicted RBP10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 RABL2BQ9UNT1 228 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 PRELID1Q9Y255 219 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 HEBP2Q9Y5Z4 205 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 ZNF292O60281 2723 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 LRP4O75096 1905 aa10.64□□□□□ -0.71
TSPAN1-201ENST00000372003 LOC102723532A0A0G2JNH3 316 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 ANKDD1BA6NHY2 528 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 SYT5O00445 386 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 HMGN4O00479 90 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 FABP7O15540 132 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 SLC28A2O43868 658 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 PLOD3O60568 738 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 UBXN7O94888 489 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CEACAM1P13688 526 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 ACP1P24666 158 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 EVI2BP34910 448 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CAPZA2P47755 286 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 MANFP55145 182 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 PCBP4P57723 403 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 TRA2BP62995 288 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 TSPAN31Q12999 210 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 GPR18Q14330 331 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CCSMST1Q4G0I0 132 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 RPS26P11Q5JNZ5 115 aaPredicted RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 NKAIN2Q5VXU1 208 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 HBMQ6B0K9 141 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 LCTLQ6UWM7 567 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 BCDIN3DQ7Z5W3 292 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 ASPGQ86U10 573 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 TPRA1Q86W33 373 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 UBE2J2Q8N2K1 259 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 IQCF1Q8N6M8 205 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 SYT14Q8NB59 555 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 OR6C4Q8NGE1 309 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 OR9A1PQ8NGU1 263 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 NAT6Q93015 286 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CLIP3Q96DZ5 547 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 TM9SF2Q99805 663 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 RNF32Q9H0A6 362 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 SAP130Q9H0E3 1048 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 RHBGQ9H310 441 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 DPAGT1Q9H3H5 408 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 GHITMQ9H3K2 345 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 MVB12BQ9H7P6 319 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CUEDC1Q9NWM3 386 aaPredicted RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 PLAGL1Q9UM63 463 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 YARS2Q9Y2Z4 477 aaKnown RBP10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 FAM186AA6NE01 2351 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 GVINP1Q7Z2Y8 2422 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CABIN1Q9Y6J0 2220 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 CCDC88CQ9P219 2028 aa10.63□□□□□ -0.71
TSPAN1-201ENST00000372003 SH3BGRLO75368 114 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 ITGA10O75578 1167 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 RGS9O75916 674 aaPredicted RBP10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 TYRP1P17643 537 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 AHCYP23526 432 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 AVPR1BP47901 424 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 ARFIP1P53367 373 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 SNRPD2P62316 118 aaKnown RBP10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 CCL7P80098 99 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 HSF2Q03933 536 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 GRK1Q15835 563 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 AADACL4Q5VUY2 407 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 PYHIN1Q6K0P9 492 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 USP53Q70EK8 1073 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 GLRX5Q86SX6 157 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 FAM20CQ8IXL6 584 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 AVL9Q8NBF6 648 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 OR4E2Q8NGC2 313 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 OR4D11Q8NGI4 311 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 OR5K2Q8NHB8 316 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 SENP5Q96HI0 755 aaPredicted RBP10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 AHCYL2Q96HN2 611 aaKnown RBP10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 ARPC5LQ9BPX5 153 aa10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 THAP7Q9BT49 309 aaPredicted RBP10.62□□□□□ -0.71
TSPAN1-201ENST00000372003 PINK1Q9BXM7 581 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms