RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MISPQ8IVT2 679 aa24.08■■□□□ 1.45
ATPAF1-202ENST00000371937 IMPAD1Q9NX62 359 aa24.08■■□□□ 1.45
ATPAF1-202ENST00000371937 TMEM5Q9Y2B1 443 aa24.08■■□□□ 1.45
ATPAF1-202ENST00000371937 SDK2Q58EX2 2172 aa24.08■■□□□ 1.45
ATPAF1-202ENST00000371937 WDFY3Q8IZQ1 3526 aa24.08■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF354AO60765 605 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 OR2J2O76002 312 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 ANGPTL1O95841 491 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 ICAM2P13598 275 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 OTX2P32243 289 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 RASSF6Q6ZTQ3 369 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 PPP1R32Q7Z5V6 425 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 ENTHD1Q8IYW4 607 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 CNIH3Q8TBE1 160 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 CCNL2Q96S94 520 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF426Q9BUY5 554 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF292O60281 2723 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 CUL9Q8IWT3 2517 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 STMND1H3BQB6 276 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 KLF4O43474 513 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 OIP5O43482 229 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 HCRTR2O43614 444 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 TP53P04637 393 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 CCDC159P0C7I6 412 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 FBXW4P57775 412 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 CXCR4P61073 352 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF117Q03924 483 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 PRKCDQ05655 676 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 APOFQ13790 326 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 LINC00114Q6XXX2 140 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 RTN4RQ9BZR6 473 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF160Q9HCG1 818 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 RASSF1Q9NS23 344 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 TUBA8Q9NY65 449 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 RNF6Q9Y252 685 aa24.07■■□□□ 1.44
ATPAF1-202ENST00000371937 A0A087WXM4 84 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 PIP5K1CO60331 668 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 RAD1O60671 282 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 SMNDC1O75940 238 aaKnown RBP eCLIP24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 CEACAM1P13688 526 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 ATP6V1B1P15313 513 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 CRHBPP24387 322 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 DLSTP36957 453 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 TUBA4AP68366 448 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 OR5M3Q8NGP4 307 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 HGDQ93099 445 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF566Q969W8 418 aa24.06■■□□□ 1.44
ATPAF1-202ENST00000371937 MPZL2O60487 215 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 FBXO45P0C2W1 286 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 GPR4P46093 362 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 HLCSP50747 726 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 SLX4IPQ5VYV7 408 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 TMEM236Q5W0B7 351 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 LAIR2Q6ISS4 152 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 MEX3DQ86XN8 651 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 RHOXF1Q8NHV9 184 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 SH3YL1Q96HL8 342 aaPredicted RBP24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 RYDENQ9NUL5 291 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 A0A087WUJ7 227 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 SCO2O43819 266 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 IGFBP1P08833 259 aaPredicted RBP24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 PNMTP11086 282 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 IFI30P13284 250 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 CTBP2P56545 445 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 TEX47Q8TBZ9 253 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 UBE2FQ969M7 185 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 C3orf49Q96BT1 292 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 BPIFA2Q96DR5 249 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 RASL10BQ96S79 203 aa24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 ZFHX2Q9C0A1 2572 aaPredicted RBP24.05■■□□□ 1.44
ATPAF1-202ENST00000371937 SLC1A7O00341 560 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 HPP00738 406 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 EEF1B2P24534 225 aaKnown RBP24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 CD82P27701 267 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 CSNK2BP67870 215 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 TEKQ02763 1124 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 BROXQ5VW32 411 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 LYPD8Q6UX82 237 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 CASP12Q6UXS9 341 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 TMPRSS11FQ6ZWK6 438 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 BPIFB6Q8NFQ5 453 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 OR5W2Q8NH69 310 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 PFN4Q8NHR9 129 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 ZNF563Q8TA94 476 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 OSTF1Q92882 214 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 NODALQ96S42 347 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 ICAM5Q9UMF0 924 aa24.04■■□□□ 1.44
ATPAF1-202ENST00000371937 PGCP20142 388 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 SLC1A3P43003 542 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 GIPRP48546 466 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 GABARAPL2P60520 117 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 GABREP78334 506 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 KIF18BQ86Y91 864 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 P3H2Q8IVL5 708 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 CLDN22Q8N7P3 220 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 SPACA9Q96E40 222 aaPredicted RBP24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 SCN3BQ9NY72 215 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 IL20Q9NYY1 176 aa24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 YARS2Q9Y2Z4 477 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-202ENST00000371937 HEATR5AQ86XA9 2040 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms