RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SMCO3A2RU48 225 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 YY2O15391 372 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 DNAJB6O75190 326 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 CNOT4O95628 575 aaKnown RBP18.39■□□□□ 0.53
LMO4-202ENST00000370544 PPA1Q15181 289 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 MAN2C1Q9NTJ4 1040 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 TEX10Q9NXF1 929 aaPredicted RBP18.39■□□□□ 0.53
LMO4-202ENST00000370544 PIGBOS1A0A0B4J2F0 54 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 MPIG6BO95866 241 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 CHRNEQ04844 493 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 ACSM3Q53FZ2 586 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 OR14A16Q8NHC5 309 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 ANKRD36CQ5JPF3 1778 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 IFNA2P01563 188 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 VASPP50552 380 aaPredicted RBP18.39■□□□□ 0.53
LMO4-202ENST00000370544 EEF1A1P68104 462 aaKnown RBP18.39■□□□□ 0.53
LMO4-202ENST00000370544 GPR50Q13585 617 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 GATA6Q92908 595 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 EPHX3Q9H6B9 360 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 INPP5EQ9NRR6 644 aa18.39■□□□□ 0.53
LMO4-202ENST00000370544 NSG1A0A0A6YYJ2 146 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 RFXAPO00287 272 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 DRD5P21918 477 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 ITGB8P26012 769 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 EMX1Q04741 257 aaPredicted RBP18.38■□□□□ 0.53
LMO4-202ENST00000370544 PDE7AQ13946 482 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 TMEM201Q5SNT2 666 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 MRI1Q9BV20 369 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 PLEK2Q9NYT0 353 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 USP22Q9UPT9 525 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 A0A1B0GUL6 1792 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.38■□□□□ 0.53
LMO4-202ENST00000370544 SLC16A7O60669 478 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 EPHA4P54764 986 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 SLC6A19Q695T7 634 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 CHRDQ9H2X0 955 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 OPN1LWP04000 364 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 TJP1Q07157 1748 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 BCL7AQ4VC05 210 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 TMEM246Q9BRR3 403 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 MS4A8Q9BY19 250 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 ADAM18Q9Y3Q7 739 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 EFCAB7A8K855 629 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 EGFP01133 1207 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 CFAP77Q6ZQR2 320 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 RCBTB1Q8NDN9 531 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 CHPT1Q8WUD6 406 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 SYT3Q9BQG1 590 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 CARD8Q9Y2G2 431 aa18.38■□□□□ 0.53
LMO4-202ENST00000370544 TRBV4-1A0A0J9YWV2 114 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 FAM183AA6NL82 134 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 GOSR2O14653 212 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 SCRG1O75711 98 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 FURINP09958 794 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 RAC2P15153 192 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 SF3B4Q15427 424 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMO4-202ENST00000370544 OR5M10Q6IEU7 315 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 TMEM53Q6P2H8 277 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 PIWIL3Q7Z3Z3 882 aaKnown RBP18.37■□□□□ 0.53
LMO4-202ENST00000370544 OBP2AQ9NY56 170 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 ACP2P11117 423 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 CSNK1EP49674 416 aaKnown RBP18.37■□□□□ 0.53
LMO4-202ENST00000370544 RIPPLY1Q0D2K3 151 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 SQSTM1Q13501 440 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 NKPD1Q17RQ9 610 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 ZNF322Q6U7Q0 402 aaPredicted RBP18.37■□□□□ 0.53
LMO4-202ENST00000370544 GGHQ92820 318 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 DPCDQ9BVM2 203 aaPredicted RBP18.37■□□□□ 0.53
LMO4-202ENST00000370544 SLC6A14Q9UN76 642 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 NOTOA8MTQ0 251 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 UPK1BO75841 260 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 MYOGP15173 224 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 HMGA1P17096 107 aaKnown RBP18.37■□□□□ 0.53
LMO4-202ENST00000370544 ABHD5Q8WTS1 349 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 ZNF587Q96SQ5 575 aaPredicted RBP18.37■□□□□ 0.53
LMO4-202ENST00000370544 OR10A5Q9H207 317 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 OR10A2Q9H208 303 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 TAPBPO15533 448 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 SLCO2B1O94956 709 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 CRHBPP24387 322 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 HOXA9P31269 272 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 GPR139Q6DWJ6 353 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 Q6ZSR9 355 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 TRAPPC6BQ86SZ2 158 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 SLC38A5Q8WUX1 472 aa18.37■□□□□ 0.53
LMO4-202ENST00000370544 UBFD1O14562 309 aaKnown RBP18.36■□□□□ 0.53
LMO4-202ENST00000370544 OPN5Q6U736 354 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 C16orf58Q96GQ5 468 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 EGLN3Q9H6Z9 239 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 COL16A1Q07092 1604 aaPredicted RBP18.36■□□□□ 0.53
LMO4-202ENST00000370544 SERPINA5P05154 406 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 AKR1C2P52895 323 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 ARF1P84077 181 aaKnown RBP18.36■□□□□ 0.53
LMO4-202ENST00000370544 SYNPRQ8TBG9 265 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 CITO14578 2027 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 A0A0A6YYH2 397 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 A6NJ64 397 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 TMEM244Q5VVB8 128 aa18.36■□□□□ 0.53
LMO4-202ENST00000370544 ABHD12BQ7Z5M8 362 aaPredicted RBP18.36■□□□□ 0.53
LMO4-202ENST00000370544 ZNF576Q9H609 170 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms