RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 NMNAT1Q9HAN9 279 aaPredicted RBP8.06□□□□□ -1.12
SNX27-201ENST00000368838 BATF3Q9NR55 127 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 COPS7AQ9UBW8 275 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 TESQ9UGI8 421 aaKnown RBP8.06□□□□□ -1.12
SNX27-201ENST00000368838 MKL2Q9ULH7 1088 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 CBLCQ9ULV8 474 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 A4GNTQ9UNA3 340 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 ERVK-19Q9WJR5 959 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 SH3GLB1Q9Y371 365 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 SAMHD1Q9Y3Z3 626 aaKnown RBP8.06□□□□□ -1.12
SNX27-201ENST00000368838 HS3ST3B1Q9Y662 390 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 EML6Q6ZMW3 1958 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 ABCA12Q86UK0 2595 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 CACNA1CQ13936 2221 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 MAGEA13PA6NCF6 341 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SAGE2PA6NJ88 616 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 TNFRSF11BO00300 401 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 FFAR1O14842 300 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 E2F6O75461 281 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 F10P00742 488 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 IFNA16P05015 189 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 H1F0P07305 194 aaKnown RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 IL7RP16871 459 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 TNNI3P19429 210 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 CBLP22681 906 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 MMP11P24347 488 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 GSTT1P30711 240 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 RRM2P31350 389 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SSTR4P31391 388 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 RYKP34925 604 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 CAPGP40121 348 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 EMP2P54851 167 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 DLX5P56178 289 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 CXCR4P61073 352 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 ALDH6A1Q02252 535 aaKnown RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 ID2Q02363 134 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 Q0VFX4 171 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 ST3GAL3Q11203 375 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 FGFBP1Q14512 234 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 DECR1Q16698 335 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 LRRC36Q1X8D7 754 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 KLHL26Q53HC5 615 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 TMEM81Q6P7N7 255 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 ZNF613Q6PF04 617 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 KIRREL2Q6UWL6 708 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 UGT2A3Q6UWM9 527 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 NPSR1Q6W5P4 371 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 Q6ZS92 163 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SZRD1Q7Z422 152 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 ANKRD37Q7Z713 158 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 STK32CQ86UX6 486 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 TSPYL5Q86VY4 417 aaPredicted RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 DND1Q8IYX4 353 aaKnown RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 SHISA5Q8N114 240 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SLC43A2Q8N370 569 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SLC15A4Q8N697 577 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SMYD1Q8NB12 490 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 APCDD1LQ8NCL9 501 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SIMC1Q8NDZ2 872 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 OR5L2Q8NGL0 311 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 SLC2A12Q8TD20 617 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 GRHL3Q8TE85 626 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 GIPC3Q8TF64 312 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 METTL21AQ8WXB1 218 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 DIO2Q92813 273 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 C8orf44Q96CB5 159 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 VMP1Q96GC9 406 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 THOC3Q96J01 351 aaKnown RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 C5orf34Q96MH7 638 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 IP6K3Q96PC2 410 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 LPAR4Q99677 370 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 PITX2Q99697 317 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 WDR77Q9BQA1 342 aaPredicted RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 RSRP1Q9BUV0 290 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 DGCR6LQ9BY27 220 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 C12orf10Q9HB07 376 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 EQTNQ9NQ60 294 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 UBQLN4Q9NRR5 601 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 MGAT4BQ9UQ53 548 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 ZNF443Q9Y2A4 671 aaPredicted RBP8.05□□□□□ -1.12
SNX27-201ENST00000368838 SLC35A3Q9Y2D2 325 aa8.05□□□□□ -1.12
SNX27-201ENST00000368838 hCG_2014768A0A024R1R8 64 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 OR6C70A6NIJ9 312 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 SAC3D1A6NKF1 404 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 TRIM64CA6NLI5 447 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 PDLIM1O00151 329 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 TSPAN2O60636 221 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 MRPS14O60783 128 aaKnown RBP8.04□□□□□ -1.12
SNX27-201ENST00000368838 UGT2B11O75310 529 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 GADD45GO95257 159 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 OPN1SWP03999 348 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 CELA2AP08217 269 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 TBXA2RP21731 343 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 IFNGR2P38484 337 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 ZNF136P52737 540 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 CASP9P55211 416 aa8.04□□□□□ -1.12
SNX27-201ENST00000368838 ESRRGP62508 458 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms