RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 BCKDHAP12694 445 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 DDX5P17844 614 aaKnown RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 KRT4P19013 534 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 ELK4P28324 431 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 KRTAP1-1Q07627 177 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 DMTNQ08495 405 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 FAPQ12884 760 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 TP53BP2Q13625 1128 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 MLC1Q15049 377 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 TOMM34Q15785 309 aaPredicted RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 TMEM176BQ3YBM2 270 aaPredicted RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 SPDYE7PQ495Y7 208 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 DCST2Q5T1A1 773 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 LYPD4Q6UWN0 246 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 RNF165Q6ZSG1 346 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 MTERF4Q7Z6M4 381 aaKnown RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 GABRG1Q8N1C3 465 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF527Q8NB42 609 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 KBTBD8Q8NFY9 601 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 OR7A2PQ8NGA2 310 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 AGR3Q8TD06 166 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 ADAMTS15Q8TE58 950 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 EPS8L3Q8TE67 593 aaKnown RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 ZFP90Q8TF47 636 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 TWIST2Q8WVJ9 160 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 KISS1RQ969F8 398 aaPredicted RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 COQ10BQ9H8M1 238 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 ANKZF1Q9H8Y5 726 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 NGBQ9NPG2 151 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 DUSP22Q9NRW4 184 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 ATP6V1HQ9UI12 483 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 PRSS50Q9UI38 385 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 ICAM5Q9UMF0 924 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 MAGED1Q9Y5V3 778 aaPredicted RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 KCNE3Q9Y6H6 103 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 KIF2AO00139 706 aaPredicted RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 TRIM13O60858 407 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 PEX11AO75192 247 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 CRLF1O75462 422 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 SOX30O94993 753 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 C6orf47O95873 294 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 YES1P07947 543 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 LAMP1P11279 417 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 PRKCAP17252 672 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 ENPP1P22413 925 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 ADH6P28332 368 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 MAPK1P28482 360 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 SLC7A1P30825 629 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 IDUAP35475 653 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 SOAT1P35610 550 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 ACVR1BP36896 505 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 RPL3P39023 403 aaKnown RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 CCT3P49368 545 aaKnown RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 CCR4P51679 360 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 SUMO3P55854 103 aaPredicted RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 TNP2Q05952 138 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 BSPH1Q075Z2 132 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 SELENBP1Q13228 472 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 STK11Q15831 433 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 SWI5Q1ZZU3 235 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 KLHL26Q53HC5 615 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 ADAM5Q6NVV9 412 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 CXXC5Q7LFL8 322 aaKnown RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 BHLHA15Q7RTS1 189 aaPredicted RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 OR5AK3PQ8NH89 298 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 SMAP2Q8WU79 429 aaPredicted RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 OR5P2Q8WZ92 322 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 HSD17B8Q92506 261 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 TRMOQ9BU70 441 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 C1orf50Q9BV19 199 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 ACTRT3Q9BYD9 372 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 POTEKPQ9BYX7 375 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 HOXD1Q9GZZ0 328 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 CXorf36Q9H7Y0 433 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 FAF1Q9UNN5 650 aaPredicted RBP9.18□□□□□ -0.94
CLRN3-201ENST00000368671 LIPT1Q9Y234 373 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 TRAF6Q9Y4K3 522 aa9.18□□□□□ -0.94
CLRN3-201ENST00000368671 DNHD1Q96M86 4753 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 NIPBLQ6KC79 2804 aaeCLIP9.17□□□□□ -0.94
CLRN3-201ENST00000368671 DPRXA6NFQ7 191 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF814B7Z6K7 855 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 C9JVG2 144 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 OVOL3O00110 214 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 CFLARO15519 480 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 CYP7B1O75881 506 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 LYZL6O75951 148 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 TP53P04637 393 aaPredicted RBP9.17□□□□□ -0.94
CLRN3-201ENST00000368671 KRT16P08779 473 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 DANCRP0C864 163 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 UBL4AP11441 157 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ALDH3A1P30838 453 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ATP12AP54707 1039 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ITGADQ13349 1161 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 PTGR1Q14914 329 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 QPRTQ15274 297 aa9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF672Q499Z4 452 aaPredicted RBP9.17□□□□□ -0.94
CLRN3-201ENST00000368671 ARL13AQ5H913 290 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms