RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FESP07332 822 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 GP1BBP13224 206 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 EDN3P14138 238 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 ME2P23368 584 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 SLC6A8P48029 635 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 STARP49675 285 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 RGS8P57771 180 aaPredicted RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 SESN3P58005 492 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 NCALDP61601 193 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 FOXF1Q12946 379 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 MRPL49Q13405 166 aaKnown RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 GANABQ14697 944 aaKnown RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 ZSWIM7Q19AV6 140 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 ZNF550Q7Z398 422 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 GRAMD2AQ8IUY3 354 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 ARHGAP24Q8N264 748 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 ATP6V1C2Q8NEY4 427 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 BHLHE22Q8NFJ8 381 aaPredicted RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 SMPDL3BQ92485 455 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 PROX1Q92786 737 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 CCDC124Q96CT7 223 aaKnown RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 RNF145Q96MT1 663 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 WFDC6Q9BQY6 131 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 EXOSC3Q9NQT5 275 aaKnown RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 ADPRHL2Q9NX46 363 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 SH3GLB1Q9Y371 365 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 SNX13Q9Y5W8 968 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 V9GYQ6 96 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 DNAJC13O75165 2243 aa12.58□□□□□ -0.39
TPM3-211ENST00000368531 A0A087WZY1 265 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 OR2M5A3KFT3 312 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 H3BML4 177 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ARPC2O15144 300 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 GSC2O15499 205 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 SUSD5O60279 629 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 HCN1O60741 890 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 LGI1O95970 557 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 OPN1LWP04000 364 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ABOP16442 354 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 PRKCAP17252 672 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 BMP7P18075 431 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 CCNA2P20248 432 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 GCKP35557 465 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 OR1E2P47887 323 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 B3GALT5-AS1P59052 145 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 SRYQ05066 204 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
TPM3-211ENST00000368531 EPS8Q12929 822 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 C3AR1Q16581 482 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 SPATS1Q496A3 300 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ARHGAP11AQ6P4F7 1023 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 CYP2R1Q6VVX0 501 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 VTCN1Q7Z7D3 282 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ZNF605Q86T29 641 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 LACC1Q8IV20 430 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 POC1BQ8TC44 478 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 RASSF5Q8WWW0 418 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 TMEM234Q8WY98 164 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 LZICQ8WZA0 190 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 MED12Q93074 2177 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ABTB1Q969K4 478 aaPredicted RBP12.58□□□□□ -0.4
TPM3-211ENST00000368531 MCUR1Q96AQ8 359 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 MIB2Q96AX9 1013 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 NSMCE2Q96MF7 247 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 CADM1Q9BY67 442 aaKnown RBP12.58□□□□□ -0.4
TPM3-211ENST00000368531 CTPS2Q9NRF8 586 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ALKBH4Q9NXW9 302 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 MAGEL2Q9UJ55 1249 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ACAD8Q9UKU7 415 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 BAG5Q9UL15 447 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 ZNF337Q9Y3M9 751 aa12.58□□□□□ -0.4
TPM3-211ENST00000368531 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 SYT5O00445 386 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 AQP7O14520 342 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 TPOP07202 933 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 PEPDP12955 493 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 UQCRBP14927 111 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 PTGS2P35354 604 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 ZNF136P52737 540 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 COPZ1P61923 177 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 SELENOWP63302 87 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 MS4A2Q01362 244 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 MERTKQ12866 999 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 FOXD4Q12950 439 aaPredicted RBP12.57□□□□□ -0.4
TPM3-211ENST00000368531 BNIP2Q12982 314 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 GLYR1Q49A26 553 aaPredicted RBP12.57□□□□□ -0.4
TPM3-211ENST00000368531 DCST1Q5T197 706 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 AAGABQ6PD74 315 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 FKBP9P1Q75LS8 142 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 CBLL1Q75N03 491 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 CARM1Q86X55 608 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 RBM45Q8IUH3 476 aaKnown RBP12.57□□□□□ -0.4
TPM3-211ENST00000368531 UBQLNLQ8IYU4 475 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 ST6GALNAC3Q8NDV1 305 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms