RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 METTL25Q8N6Q8 603 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 FBXO27Q8NI29 283 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 CNOT9Q92600 299 aaKnown RBP20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 ADGRG7Q96K78 797 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 CALML5Q9NZT1 146 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 PKDREJQ9NTG1 2253 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 ADGRG4Q8IZF6 3080 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 HSPB2A8KAH6 182 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 IL2RAP01589 272 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 OPN1LWP04000 364 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 PPIBP23284 216 aaKnown RBP20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 SHC1P29353 583 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 HSPB2Q16082 182 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 ZNF787Q6DD87 383 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 VRK2Q86Y07 508 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 RELL2Q8NC24 303 aaPredicted RBP20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 WDR60Q8WVS4 1066 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 WNT2BQ93097 391 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 ZNF845Q96IR2 970 aaPredicted RBP20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 TRIM8Q9BZR9 551 aa20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 EXOSC3Q9NQT5 275 aaKnown RBP20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 DNAJB12Q9NXW2 375 aaKnown RBP20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.19■□□□□ 0.82
ECHDC1-203ENST00000368291 CACNA1DQ01668 2161 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 DBIP07108 87 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 ARAFP10398 606 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 NID1P14543 1247 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 IL7RP16871 459 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 SELPLGQ14242 412 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 MRPL2Q5T653 305 aaKnown RBP20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 CMIPQ8IY22 773 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 FIG4Q92562 907 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 MRGPRX4Q96LA9 322 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 ANKRD27Q96NW4 1050 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 CGREF1Q99674 301 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 PINK1Q9BXM7 581 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 RSPO3Q9BXY4 272 aaPredicted RBP20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 TMEM185BQ9H7F4 350 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 BCL2L10Q9HD36 194 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 MRGBPQ9NV56 204 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 CHST2Q9Y4C5 530 aa20.18■□□□□ 0.82
ECHDC1-203ENST00000368291 A0A0G2JPF8 293 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 A0A0J9YW62 118 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 HNRNPCL2B2RXH8 293 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 HNRNPCL3B7ZW38 293 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 HNRNPCL1O60812 293 aaKnown RBP20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 RCBTB2O95199 551 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 HNRNPCL4P0DMR1 293 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 ELK4P28324 431 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 DLX5P56178 289 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 SESN3P58005 492 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 FOXF2Q12947 444 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 ADRM1Q16186 407 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 PRAMEF8Q5VWM4 474 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 PRAMEF7Q5VXH5 474 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 PEX5LQ8IYB4 626 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 LILRA2Q8N149 483 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 ACBD4Q8NC06 268 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 OR52P1PQ8NH57 321 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 TM9SF2Q99805 663 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 CHST11Q9NPF2 352 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 KCNJ16Q9NPI9 418 aa20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 ZNF629Q9UEG4 869 aaPredicted RBP20.17■□□□□ 0.82
ECHDC1-203ENST00000368291 MPDZO75970 2070 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 EIF1AYO14602 144 aaKnown RBP20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 ADAMDEC1O15204 470 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 PGM3O95394 542 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 PGCP20142 388 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 ADSLP30566 484 aaPredicted RBP20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 LSP1P33241 339 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 EEFSECP57772 596 aaKnown RBP20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 EEF1A1P68104 462 aaKnown RBP20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 NFYCQ13952 458 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 GNA13Q14344 377 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 GCNT6Q5T4J0 391 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 ZNF836Q6ZNA1 936 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 GRAMD2AQ8IUY3 354 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 ST8SIA1Q92185 356 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 TMEM38AQ9H6F2 299 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 NPDC1Q9NQX5 325 aaPredicted RBP20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 RLIMQ9NVW2 624 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 STOML1Q9UBI4 398 aa20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 ZNF443Q9Y2A4 671 aaPredicted RBP20.16■□□□□ 0.82
ECHDC1-203ENST00000368291 TMEM247A6NEH6 219 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 EVPLLA8MZ36 301 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 AP3D1O14617 1153 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 TMIGD3P0DMS9 266 aaPredicted RBP20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 DRD4P21917 467 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 BMP5P22003 454 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 CTSSP25774 331 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 RYKP34925 604 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 AGFG1P52594 562 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 MTPNP58546 118 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 RPS3AP61247 264 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 CAPRIN1Q14444 709 aaKnown RBP20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 SLC25A35Q3KQZ1 300 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 ESPNLQ6ZVH7 1005 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 CHMP1BQ7LBR1 199 aa20.15■□□□□ 0.82
ECHDC1-203ENST00000368291 OR10D3Q8NH80 312 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms