RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 BCAS4Q8TDM0 211 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 CNOT9Q92600 299 aaKnown RBP8.93□□□□□ -0.98
NUP43-202ENST00000367402 ARSGQ96EG1 525 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 WDYHV1Q96HA8 205 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 RNF145Q96MT1 663 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 ZNF607Q96SK3 696 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 HOPXQ9BPY8 73 aaPredicted RBP8.93□□□□□ -0.98
NUP43-202ENST00000367402 VKORC1Q9BQB6 163 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 SPATA5L1Q9BVQ7 753 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 TAGLN3Q9UI15 199 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 ZNF443Q9Y2A4 671 aaPredicted RBP8.93□□□□□ -0.98
NUP43-202ENST00000367402 MEMO1Q9Y316 297 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 DSPPQ9NZW4 1301 aa8.93□□□□□ -0.98
NUP43-202ENST00000367402 GCN1Q92616 2671 aaKnown RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 MYO18BQ8IUG5 2567 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 RP1L1Q8IWN7 2480 aaPredicted RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 NINQ8N4C6 2090 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 EXPH5Q8NEV8 1989 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 CDHR4A6H8M9 788 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 PRORSD1PA6NEY8 169 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 CFAP73A6NFT4 308 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 CCT8L1PA6NM43 557 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 H0Y3Z8 333 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 M0QX08 132 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 SEC14L5O43304 696 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 WDR1O75083 606 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 OPN1LWP04000 364 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 THBS1P07996 1170 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 HOXD4P09016 255 aaPredicted RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 GKN3PP0CG01 181 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 PEPDP12955 493 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 GABRA1P14867 456 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 CPN1P15169 458 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 ZNF17P17021 662 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 PGCP20142 388 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 PCGF2P35227 344 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 SLC6A8P48029 635 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 IDH2P48735 452 aaKnown RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 LHX2P50458 406 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 GZMMP51124 257 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 PER3P56645 1201 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 EEF1A1P68104 462 aaKnown RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 PMPCAQ10713 525 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 FOXF1Q12946 379 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 SF3B4Q15427 424 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■■■■□ 21.6
NUP43-202ENST00000367402 BCL2A1Q16548 175 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 ZSWIM7Q19AV6 140 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 VMACQ2NL98 169 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 TMEM44Q2T9K0 475 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 TMEM211Q6ICI0 200 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 MTFR2Q6P444 385 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 B3GNT6Q6ZMB0 384 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 CHMP1BQ7LBR1 199 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 NET1Q7Z628 596 aaPredicted RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 ARPINQ7Z6K5 226 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 ARMC8Q8IUR7 673 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 SLC30A8Q8IWU4 369 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 ULK2Q8IYT8 1036 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 UBQLNLQ8IYU4 475 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 CLIP4Q8N3C7 705 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 GTPBP8Q8N3Z3 284 aaPredicted RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 MEIOBQ8N635 442 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 FITM2Q8N6M3 262 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 FAM71CQ8NEG0 241 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 ATP6V1C2Q8NEY4 427 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 POC1BQ8TC44 478 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 TMEM234Q8WY98 164 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 SMPDL3BQ92485 455 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 REXO5Q96IC2 774 aaKnown RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 ZNF583Q96ND8 569 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 TRIB1Q96RU8 372 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 NPAS1Q99742 590 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 GPATCH1Q9BRR8 931 aaKnown RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 SPATA9Q9BWV2 254 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 PRDM14Q9GZV8 571 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 EXOSC3Q9NQT5 275 aaKnown RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 ARL8BQ9NVJ2 186 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 CMTM6Q9NX76 183 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 DNAJB12Q9NXW2 375 aaKnown RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 STOML1Q9UBI4 398 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 AP3M1Q9Y2T2 418 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 GPC6Q9Y625 555 aaPredicted RBP8.92□□□□□ -0.98
NUP43-202ENST00000367402 AP4B1Q9Y6B7 739 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 EML6Q6ZMW3 1958 aa8.92□□□□□ -0.98
NUP43-202ENST00000367402 TENM4Q6N022 2769 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 HELZ2Q9BYK8 2649 aaKnown RBP8.91□□□□□ -0.98
NUP43-202ENST00000367402 C7orf72A4D263 438 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 ADAM11O75078 769 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 GP1BBP13224 206 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 UQCRBP14927 111 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 ZNF708P17019 499 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 PRKCAP17252 672 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 ME2P23368 584 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 PSMA4P25789 261 aaKnown RBP8.91□□□□□ -0.98
NUP43-202ENST00000367402 ADH6P28332 368 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 PRKAR1BP31321 381 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 PTGER4P35408 488 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 SLC7A2P52569 658 aa8.91□□□□□ -0.98
NUP43-202ENST00000367402 SUCLG1P53597 346 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms