RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SORCS2Q96PQ0 1159 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 IL21RQ9HBE5 538 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 ACOT8O14734 319 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 GABARAPO95166 117 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 TFAP2AP05549 437 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 GPR19Q15760 415 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 AGAP7PQ5VUJ5 663 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 CD300LGQ6UXG3 332 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 TCTN2Q96GX1 697 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 ALOXE3Q9BYJ1 711 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
CDC42BPA-203ENST00000366766 PER3P56645 1201 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF91Q05481 1191 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 FOXRED2Q8IWF2 684 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 TM9SF4Q92544 642 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR1F2PQ96R84 312 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 PSD2Q9BQI7 771 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF850A8MQ14 1090 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ARSBP15848 533 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 HLA-FP30511 346 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 PODNL1Q6PEZ8 512 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 PARP16Q8N5Y8 322 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 SLC38A5Q8WUX1 472 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 DPH1Q9BZG8 443 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 BOLA2-SMG1P6H3BVE0 249 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 SULT1B1O43704 296 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR7A10O76100 309 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 PPP1R3DO95685 299 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 TATDN3Q17R31 274 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 NXNL2Q5VZ03 156 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 NIPAL3Q6P499 406 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 GTPBP8Q8N3Z3 284 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 SULT4A1Q9BR01 284 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 GABARAPL1Q9H0R8 117 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 CNOT1A5YKK6 2376 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 SCAMP1O15126 338 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 TPD52L2O43399 206 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 GALR3O60755 368 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 REEP5Q00765 189 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 PARS2Q7L3T8 475 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZSCAN1Q8NBB4 408 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 C16orf58Q96GQ5 468 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 SLC22A5O76082 557 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 FUT1P19526 365 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ECI1P42126 302 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 TNFRSF17Q02223 184 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 RAB31Q13636 194 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ACSM3Q53FZ2 586 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 YOD1Q5VVQ6 348 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 IL17RCQ8NAC3 791 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ALKBH4Q9NXW9 302 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 LOC100509620A0A075B734 347 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 MAS1P04201 325 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 BLOC1S1P78537 153 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 SLCO4C1Q6ZQN7 724 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 MBOAT2Q6ZWT7 520 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ELP4Q96EB1 424 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 PEX11GQ96HA9 241 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR10A5Q9H207 317 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR10A2Q9H208 303 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 INIPQ9NRY2 104 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 MPEG1Q2M385 716 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 TSSK4Q6SA08 328 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 BEST4Q8NFU0 473 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 RRNAD1Q96FB5 475 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 TCEAL7Q9BRU2 100 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR7A17O14581 309 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 RAB3DO95716 219 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 GABRB3P28472 473 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 C18orf21Q32NC0 220 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 Q8N9G6 341 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 GIMAP5Q96F15 307 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR51E2Q9H255 320 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 DIMT1Q9UNQ2 313 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ALDH3B2P48448 385 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 SRPXP78539 464 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 CORINQ9Y5Q5 1042 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 LY75O60449 1722 aa11.28□□□□□ -0.6
CDC42BPA-203ENST00000366766 ALPK2Q86TB3 2170 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 GTDC1Q4AE62 458 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 GALNT10Q86SR1 603 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF100Q8IYN0 542 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 WDR20Q8TBZ3 569 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.68e-7■■■□□ 18.4
CDC42BPA-203ENST00000366766 PLCXD1Q9NUJ7 323 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 TTLL10Q6ZVT0 673 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 RAB11FIP2Q7L804 512 aa11.27□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR52N1Q8NH53 320 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms