RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 OR5W2Q8NH69 310 aa18.27■□□□□ 0.51
TRIM58-201ENST00000366481 LILRB1Q8NHL6 650 aaPredicted RBP18.27■□□□□ 0.51
TRIM58-201ENST00000366481 OR5P2Q8WZ92 322 aa18.27■□□□□ 0.51
TRIM58-201ENST00000366481 COL26A1Q96A83 441 aa18.27■□□□□ 0.51
TRIM58-201ENST00000366481 TRIM36Q9NQ86 728 aa18.27■□□□□ 0.51
TRIM58-201ENST00000366481 TBC1D3BA6NDS4 549 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 MFSD2BA6NFX1 497 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 HYAL3O43820 417 aaPredicted RBP18.26■□□□□ 0.51
TRIM58-201ENST00000366481 OR5F1O95221 314 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 CISD3P0C7P0 127 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 CXCL2P19875 107 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 GDNFP39905 211 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 MNX1P50219 401 aaPredicted RBP18.26■□□□□ 0.51
TRIM58-201ENST00000366481 OR5M10Q6IEU7 315 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 FAAP20Q6NZ36 180 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 C11orf88Q6PI97 169 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 ZNF793Q6ZN11 406 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 SIRT6Q8N6T7 355 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 OR4D9Q8NGE8 314 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 OR13C5Q8NGS8 318 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 PIGXQ8TBF5 258 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 SLC35G5Q96KT7 338 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 DPYSL5Q9BPU6 564 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 ACTR6Q9GZN1 396 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 ZNF175Q9Y473 711 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 TRBV23OR9-2A0A075B6M9 112 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 ANXA2P2A6NMY6 339 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 C4orf51C9J302 202 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 NDUFS4O43181 175 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 PAK4O96013 591 aaPredicted RBP18.26■□□□□ 0.51
TRIM58-201ENST00000366481 PRNPP04156 253 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 DRD2P14416 443 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 ZNF169Q14929 603 aaPredicted RBP18.26■□□□□ 0.51
TRIM58-201ENST00000366481 C1orf94Q6P1W5 598 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 LRRTM4Q86VH4 590 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 SHISA5Q8N114 240 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 GNPDA2Q8TDQ7 276 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 GLS2Q9UI32 602 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 GPR55Q9Y2T6 319 aaPredicted RBP18.26■□□□□ 0.51
TRIM58-201ENST00000366481 ALPK3Q96L96 1907 aa18.26■□□□□ 0.51
TRIM58-201ENST00000366481 KIAA0355O15063 1070 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 CHRM4P08173 479 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 PRG2P13727 222 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 RAB3AP20336 220 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 RAB3BP20337 219 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 SLC22A10Q63ZE4 541 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 C18orf63Q68DL7 685 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 TBC1D19Q8N5T2 526 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 CXorf40AQ8TE69 158 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 WDR34Q96EX3 536 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 A4GALTQ9NPC4 353 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 MBNL1Q9NR56 388 aaKnown RBP18.25■□□□□ 0.51
TRIM58-201ENST00000366481 GMEB2Q9UKD1 530 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 GMDSO60547 372 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 EPPINO95925 133 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 HMGN2P05204 90 aaKnown RBP18.25■□□□□ 0.51
TRIM58-201ENST00000366481 ZNF234Q14588 700 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 PDZD9Q8IXQ8 264 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 OR8D1Q8WZ84 308 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 FAIM2Q9BWQ8 316 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 C6orf106Q9H6K1 298 aaPredicted RBP18.25■□□□□ 0.51
TRIM58-201ENST00000366481 CBLCQ9ULV8 474 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 TSPAN11A1L157 253 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 ERI3O43414 337 aaKnown RBP18.25■□□□□ 0.51
TRIM58-201ENST00000366481 NMBP08949 121 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 RAD52P43351 418 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 ERVK-25P63136 954 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 NHLRC3Q5JS37 347 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 VRK2Q86Y07 508 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 DCUN1D3Q8IWE4 304 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 ZNF433Q8N7K0 673 aaPredicted RBP18.25■□□□□ 0.51
TRIM58-201ENST00000366481 MRPL43Q8N983 215 aaKnown RBP18.25■□□□□ 0.51
TRIM58-201ENST00000366481 PTP4A1Q93096 173 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 UBE2E3Q969T4 207 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 AICDAQ9GZX7 198 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 LDAHQ9H6V9 325 aa18.25■□□□□ 0.51
TRIM58-201ENST00000366481 AK6Q9Y3D8 172 aaKnown RBP18.25■□□□□ 0.51
TRIM58-201ENST00000366481 DENND4CQ5VZ89 1909 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 STX11O75558 287 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 TBXA2RP21731 343 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 PYCR1P32322 319 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 CCR8P51685 355 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 SAMD8Q96LT4 415 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 SCPEP1Q9HB40 452 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 PRKAG2Q9UGJ0 569 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 E9PI62 339 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 FMO6PO60774 539 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 RLN1P04808 185 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 ATP5A1P25705 553 aaKnown RBP18.24■□□□□ 0.51
TRIM58-201ENST00000366481 GCGRP47871 477 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 SNRPNP63162 240 aaKnown RBP18.24■□□□□ 0.51
TRIM58-201ENST00000366481 E2F1Q01094 437 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 KRT33BQ14525 404 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 NUDT13Q86X67 352 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 NRMQ8IXM6 262 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 TMEM99Q8N816 258 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 UQCC2Q9BRT2 126 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 SYNPO2LQ9H987 977 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 ATG4BQ9Y4P1 393 aa18.24■□□□□ 0.51
TRIM58-201ENST00000366481 UBL3O95164 117 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms