RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 RHBGQ9H310 441 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF334Q9HCZ1 680 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-201ENST00000361716 FBXL3Q9UKT7 428 aa11.84□□□□□ -0.51
VAMP1-201ENST00000361716 IRGMA1A4Y4 181 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 LRIT2A6NDA9 550 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 ANKRD61A6NGH8 418 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 POP4O95707 220 aaKnown RBP11.83□□□□□ -0.51
VAMP1-201ENST00000361716 LIPCP11150 499 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 PPP3CBP16298 524 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 FUT1P19526 365 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 ADH7P40394 386 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 SLC6A12P48065 614 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 HCCSP53701 268 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 HFEQ30201 348 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 ZDHHC20Q5W0Z9 365 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 RBMS3Q6XE24 437 aaKnown RBP11.83□□□□□ -0.51
VAMP1-201ENST00000361716 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 RASGEF1AQ8N9B8 481 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 SAMD8Q96LT4 415 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 C7orf50Q9BRJ6 194 aaKnown RBP11.83□□□□□ -0.51
VAMP1-201ENST00000361716 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.51
VAMP1-201ENST00000361716 XKR8Q9H6D3 395 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 TRIM36Q9NQ86 728 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 BABAM2Q9NXR7 383 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 MARK1Q9P0L2 795 aa11.83□□□□□ -0.51
VAMP1-201ENST00000361716 TRBV23OR9-2A0A075B6M9 112 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 LOC100509620A0A075B734 347 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 UBXN7O94888 489 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 MAGEB1P43366 347 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 SMCO1Q147U7 214 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 PRSS53Q2L4Q9 553 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 CMIPQ8IY22 773 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 DERL3Q96Q80 235 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 EMC3Q9P0I2 261 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 CTSFQ9UBX1 484 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 PRAMEF2O60811 474 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 RECKO95980 971 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 NOS3P29474 1203 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 DCTDP32321 178 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 MAPK8P45983 427 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 LUMP51884 338 aaPredicted RBP11.83□□□□□ -0.52
VAMP1-201ENST00000361716 ARFIP1P53367 373 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 LTB4RQ15722 352 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 GUCA2BQ16661 112 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 NDUFAF6Q330K2 333 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 CCDC157Q569K6 752 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 RAD51AP1Q96B01 352 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 C4orf36Q96KX1 117 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 ZNF354BQ96LW1 612 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 HRASLSQ9HDD0 168 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 DPP7Q9UHL4 492 aa11.83□□□□□ -0.52
VAMP1-201ENST00000361716 DSPPQ9NZW4 1301 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ADAMTS4O75173 837 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 CXCL14O95715 111 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 FGF2P09038 288 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 FURINP09958 794 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ATF1P18846 271 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 AKR1C3P42330 323 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 GCGRP47871 477 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 NCBP2P52298 156 aaKnown RBP eCLIP11.82□□□□□ -0.527e-8■■■■■ 27.5
VAMP1-201ENST00000361716 RPE65Q16518 533 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 LINC00303Q3SY05 128 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 NDUFAF7Q7L592 441 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 TMEM17Q86X19 198 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ARIH2OSQ8N7S6 290 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 C17orf47Q8NEP4 570 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 OR51Q1Q8NH59 317 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 TCEAL3Q969E4 200 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 SLC25A28Q96A46 364 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 OTUB2Q96DC9 234 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 TCEAL4Q96EI5 215 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 PPP1R16AQ96I34 528 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 MICU1Q9BPX6 476 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 BCL2L14Q9BZR8 327 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ANTXRLA6NF34 631 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 FLRT2O43155 660 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 CSN2P05814 226 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 GABRA1P14867 456 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 STAT5AP42229 794 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 CCR9P51686 369 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 OR12D2P58182 307 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 RAP2BP61225 183 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ZNF155Q12901 538 aaPredicted RBP11.82□□□□□ -0.52
VAMP1-201ENST00000361716 RBM39Q14498 530 aaKnown RBP11.82□□□□□ -0.52
VAMP1-201ENST00000361716 TAF13Q15543 124 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 TP53I3Q53FA7 332 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 GRHL2Q6ISB3 625 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 COMTD1Q86VU5 262 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 NRMQ8IXM6 262 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 OR11G2Q8NGC1 345 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ABHD4Q8TB40 342 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 TMEM38AQ9H6F2 299 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 SYNPO2LQ9H987 977 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 HMX1Q9NP08 348 aaPredicted RBP11.82□□□□□ -0.52
VAMP1-201ENST00000361716 PRKAG2Q9UGJ0 569 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 CCL26Q9Y258 94 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 A0A087WUU8 490 aa11.82□□□□□ -0.52
VAMP1-201ENST00000361716 PLSCR5A0PG75 271 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms