RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CELA3AP09093 270 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 CD247P20963 164 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 SLC1A3P43003 542 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 CCR4P51679 360 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 CRYBA2P53672 197 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 COPZ1P61923 177 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 TRIM25Q14258 630 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 NRF1Q16656 503 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 DUSP7Q16829 419 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 MTX3Q5HYI7 312 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 VASNQ6EMK4 673 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 GLYATQ6IB77 296 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 ENPP6Q6UWR7 440 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 ARSKQ6UWY0 536 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 GFRALQ6UXV0 394 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 CBLL1Q75N03 491 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 YTHDF3Q7Z739 585 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 ATCAYQ86WG3 371 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 LSMEM1Q8N8F7 131 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 PROX1Q92786 737 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 ASB9Q96DX5 294 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 ARHGDIGQ99819 225 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 POLR2J2Q9GZM3 115 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 POLR2J3Q9H1A7 115 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 LRMDAQ9H2I8 198 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 RLIMQ9NVW2 624 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 SNX13Q9Y5W8 968 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 AP4B1Q9Y6B7 739 aa12.53□□□□□ -0.4
NSMCE1-201ENST00000361439 TPST1O60507 370 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 CDC40O60508 579 aaKnown RBP eCLIP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 BCAS1O75363 584 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 PRKCAP17252 672 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 ACAA2P42765 397 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 FOXK1P85037 733 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 TRAP1Q12931 704 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 QPRTQ15274 297 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 SF3B4Q15427 424 aaKnown RBP eCLIP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 NDUFAF6Q330K2 333 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 CYBRD1Q53TN4 286 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 WIPI1Q5MNZ9 446 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 RAET1LQ5VY80 246 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 WBP2NLQ6ICG8 309 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 PGM2L1Q6PCE3 622 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 Q6ZPB1 254 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 GRINAQ7Z429 371 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 HMGN2P46Q86SG4 172 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF605Q86T29 641 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 RANBP3LQ86VV4 465 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 RNF148Q8N7C7 305 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 SMYD1Q8NB12 490 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF563Q8TA94 476 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 ABTB1Q969K4 478 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 FAM162AQ96A26 154 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 MCUR1Q96AQ8 359 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 SFXN2Q96NB2 322 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF559Q9BR84 538 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 THTPAQ9BU02 230 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 RSPO3Q9BXY4 272 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 TRIM2Q9C040 744 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 PCDHAC1Q9H158 963 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 TSPAN10Q9H1Z9 355 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 EXO5Q9H790 373 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 C12orf10Q9HB07 376 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 DCAF13Q9NV06 445 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 ACTR3BQ9P1U1 418 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 TESQ9UGI8 421 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 VDAC3Q9Y277 283 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 ZNF835Q9Y2P0 537 aa12.52□□□□□ -0.41
NSMCE1-201ENST00000361439 A0A1B0GTH9 108 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 OR2M5A3KFT3 312 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 GJE1A6NN92 205 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 GSC2O15499 205 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 STAMBPO95630 424 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 EPPINO95925 133 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 SERPINA1P01009 418 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 OPN1SWP03999 348 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 HOXD4P09016 255 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 PEPDP12955 493 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 GP1BBP13224 206 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 CPN1P15169 458 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 HOXB6P17509 224 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 BMP7P18075 431 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 TCN1P20061 433 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 PSMA4P25789 261 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 RYKP34925 604 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 PTGS2P35354 604 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 PTGER4P35408 488 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 IDH2P48735 452 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 RNF144AP50876 292 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 SESN3P58005 492 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 NCALDP61601 193 aa12.51□□□□□ -0.41
NSMCE1-201ENST00000361439 RAC1P63000 192 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms