RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SNIP1Q8TAD8 396 aaKnown RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 MVB12AQ96EY5 273 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 SCN10AQ9Y5Y9 1956 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 TRBV4-1A0A0J9YWV2 114 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 CD8B2A6NJW9 211 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 WBP4O75554 376 aaKnown RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 CCNKO75909 580 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 CD8BP10966 210 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 PGAM2P15259 253 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 PRKAR1BP31321 381 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 ARRB2P32121 409 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 GPR3P46089 330 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 TMEM201Q5SNT2 666 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 TMEM71Q6P5X7 295 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 DLEU7Q6UYE1 221 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 AKAP14Q86UN6 197 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 TMPRSS12Q86WS5 348 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 RPS19BP1Q86WX3 136 aaKnown RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 KMT5CQ86Y97 462 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 C1orf210Q8IVY1 113 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 GALNT15Q8N3T1 639 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 NRG4Q8WWG1 115 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 CLCC1Q96S66 551 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 SLC30A2Q9BRI3 323 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 C19orf53Q9UNZ5 99 aaPredicted RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 PCDHGB6Q9Y5F9 930 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 F10P00742 488 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 CSNK1A1P48729 337 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 POU3F1Q03052 451 aaPredicted RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 DUSP5Q16690 384 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 SAMD12Q8N8I0 201 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 H0YIG0 161 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 PSKH1P11801 424 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 BSGP35613 385 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 EPHA4P54764 986 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 MAD2L1BPQ15013 274 aaPredicted RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 EXT1Q16394 746 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 SLC22A10Q63ZE4 541 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 PTRH1Q86Y79 214 aaKnown RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 ESX1Q8N693 406 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 SLC6A20Q9NP91 592 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 SLAMF7Q9NQ25 335 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 FAM183AA6NL82 134 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 FTCDNL1E5RQL4 147 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 MPLP40238 635 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 RAB15P59190 212 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 TSPAN31Q12999 210 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 SMAD2Q15796 467 aaKnown RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 PGGHGQ32M88 737 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 RNF113BQ8IZP6 322 aaKnown RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 ARMC10Q8N2F6 343 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 SPNS1Q9H2V7 528 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 ABCD2Q9UBJ2 740 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 EIF3KQ9UBQ5 218 aaKnown RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 NEU3Q9UQ49 428 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 PCDHGA8Q9Y5G5 932 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 ST14Q9Y5Y6 855 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 BRWD1Q9NSI6 2320 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 PRAMEF10O60809 474 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 ZNF432O94892 652 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 FCER2P06734 321 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 KIR2DL1P43626 348 aaPredicted RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 FAM53BQ14153 422 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
CTR9-201ENST00000361367 GPR139Q6DWJ6 353 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 RADILQ96JH8 1075 aa12.89□□□□□ -0.35
CTR9-201ENST00000361367 A0A1B0GWA3 101 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 J3QRK9 145 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 KIAA0513O60268 411 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 GYPBP06028 91 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 ZNF12P17014 697 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 DPP4P27487 766 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 OR6T1Q8NGN1 323 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 CAPSLQ8WWF8 208 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 HPS1Q92902 700 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 GDF15Q99988 308 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 PLAC1Q9HBJ0 212 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 POLE3Q9NRF9 147 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 PAK1IP1Q9NWT1 392 aaPredicted RBP12.88□□□□□ -0.35
CTR9-201ENST00000361367 A6NLC8 198 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 ZNF195O14628 629 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 ACOT8O14734 319 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 SLC16A7O60669 478 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 F13BP05160 661 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 ERCC1P07992 297 aaPredicted RBP12.88□□□□□ -0.35
CTR9-201ENST00000361367 ENTPD1P49961 510 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 CAPZA1P52907 286 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 GNG2P59768 71 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 ZNF385BQ569K4 471 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 PAQR7Q86WK9 346 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 SLC35F2Q8IXU6 374 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 STACQ99469 402 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 MMP27Q9H306 513 aa12.88□□□□□ -0.35
CTR9-201ENST00000361367 CMAHPQ9Y471 501 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms