RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 A0A075B6Q4 140 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 OR2W5A6NFC9 320 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ZNF670-ZNF695F2Z2N8 137 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 PTP4A3O75365 173 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 CSTAP01040 98 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 IGHA1P01876 353 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 LIMS3P0CW19 117 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 LIMS4P0CW20 117 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 PTNP21246 168 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ALAS2P22557 587 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC1A3P43003 542 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ZNF45Q02386 682 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 LIPKQ5VXJ0 399 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 WDR74Q6RFH5 385 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 SLITRK4Q8IW52 837 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 TMEM151BQ8IW70 566 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 CENPSQ8N2Z9 138 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 OR13C2Q8NGS9 318 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 DNAJA4Q8WW22 397 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 UFD1Q92890 307 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 SENP5Q96HI0 755 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC41A2Q96JW4 573 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 CCNL2Q96S94 520 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 IFT27Q9BW83 186 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 MEPEQ9NQ76 525 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 CMC2Q9NRP2 79 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 PNO1Q9NRX1 252 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 GALNT8Q9NY28 637 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 IL20RAQ9UHF4 553 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 SERTAD3Q9UJW9 196 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 MRTO4Q9UKD2 239 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 TTC28Q96AY4 2481 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 IGKV3D-11A0A0A0MRZ8 115 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 SAGE2PA6NJ88 616 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC2A10O95528 541 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 OCM2P0CE71 109 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 OCMP0CE72 109 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 RORAP35398 523 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ADH7P40394 386 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 PPICP45877 212 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ARRB1P49407 418 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 CFHR1Q03591 330 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 MEPCEQ7L2J0 689 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 BTLAQ7Z6A9 289 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 KLHL36Q8N4N3 616 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ZNF527Q8NB42 609 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 OR52N1Q8NH53 320 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 OR1L3Q8NH93 324 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 PTPMT1Q8WUK0 201 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ABTB1Q969K4 478 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 ARHGAP9Q9BRR9 750 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 NUAK2Q9H093 628 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 TNFRSF10DQ9UBN6 386 aa16.85■□□□□ 0.29
PDLIM7-203ENST00000359895 PNMA8CA0A1B0GUJ8 204 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 HTR3EA5X5Y0 456 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 SYNDIG1LA6NDD5 238 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 HYAL3O43820 417 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 APOL3O95236 402 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 FBLP22087 321 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 PAICSP22234 425 aaKnown RBP16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC6A6P31641 620 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 ATP6V1E1P36543 226 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 OR1D4P47884 311 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC37A1P57057 533 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 COPZ1P61923 177 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 FOXK2Q01167 660 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 ACSM1Q08AH1 577 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 NNATQ16517 81 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 PLK5Q496M5 336 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 KLHL26Q53HC5 615 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 OR2G6Q5TZ20 316 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 NIPAL3Q6P499 406 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 RTL4Q6ZR62 310 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 OAFQ86UD1 273 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 CADM2Q8N3J6 435 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 ART5Q96L15 291 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 MROQ9BYG7 248 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 ZNF304Q9HCX3 659 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 MKKSQ9NPJ1 570 aaPredicted RBP16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 UBQLN4Q9NRR5 601 aa16.84■□□□□ 0.29
PDLIM7-203ENST00000359895 TNRC6BQ9UPQ9 1833 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 CCDC163A0A0D9SF12 145 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 ANKRD33BA6NCL7 494 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 RIIAD1A6NNX1 92 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 PRR23D1E9PI22 279 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 SOCS6O14544 535 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 SLC30A4O14863 429 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 PPM1BO75688 479 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 IL33O95760 270 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 DCNP07585 359 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 GIMD1P0DJR0 217 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 PRR23D2P0DMB1 279 aaPredicted RBP16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 FUT1P19526 365 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 LCN1P31025 176 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 CSF2RBP32927 897 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 DCAF7P61962 342 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 ATP1A4Q13733 1029 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 ELAVL1Q15717 326 aaKnown RBP16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 SNAP47Q5SQN1 464 aa16.83■□□□□ 0.28
PDLIM7-203ENST00000359895 PLBD1Q6P4A8 553 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms