RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 A0A0A6YYC8 382 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ISPDA4D126 451 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 A8MV72 311 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 I3L1I5 382 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 FOXS1O43638 330 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 KRT8P05787 483 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 GABRB1P18505 474 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 CSTF2P33240 577 aaKnown RBP eCLIP12.82□□□□□ -0.368e-7■■■■■ 29.8
CSNK1E-201ENST00000359867 MAP3K8P41279 467 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 MAP4K2Q12851 820 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 DUSP8Q13202 625 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 Q5BKY6 102 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 TYW3Q6IPR3 259 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 TUBA3EQ6PEY2 450 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 PODNL1Q6PEZ8 512 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF595Q8IYB9 648 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ZG16BQ96DA0 208 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 SAP130Q9H0E3 1048 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 QRSL1Q9H0R6 528 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ADAP2Q9NPF8 381 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 IMPAD1Q9NX62 359 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 DHCR7Q9UBM7 475 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 PCDHGB6Q9Y5F9 930 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 KNTC1P50748 2209 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 HYKKA2RU49 373 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 EFCAB7A8K855 629 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 AP3D1O14617 1153 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 KIAA0513O60268 411 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 GFRA3O60609 400 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 FCMRO60667 390 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ZIC2O95409 532 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 THBS1P07996 1170 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 CCL4P13236 92 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ALDH6A1Q02252 535 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 LARS2Q15031 903 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 TSTQ16762 297 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ATAD3CQ5T2N8 411 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 IDO2Q6ZQW0 420 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 WDR53Q7Z5U6 358 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 B3GNT7Q8NFL0 401 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 FCGR1BQ92637 280 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 HOXB13Q92826 284 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 DMRTB1Q96MA1 342 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF350Q9GZX5 532 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 POLE3Q9NRF9 147 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 MAN2C1Q9NTJ4 1040 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 SIDT1Q9NXL6 827 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 NDOR1Q9UHB4 597 aa12.82□□□□□ -0.36
CSNK1E-201ENST00000359867 PMS2P1A4D2B8 440 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 FITM1A5D6W6 292 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 SAGE2PA6NJ88 616 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 C12orf71A8MTZ7 269 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 CTNSO60931 367 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 NME6O75414 186 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 STX11O75558 287 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 TIAF1O95411 115 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 ICAM2P13598 275 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 RGS6P49758 472 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 IGLV3-21P80748 117 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 EIPR1Q53HC9 387 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 TTLL10Q6ZVT0 673 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 GPR135Q8IZ08 494 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 SIMC1Q8NDZ2 872 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 KBTBD8Q8NFY9 601 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 ATP13A2Q9NQ11 1180 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 ENAMQ9NRM1 1142 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 MKLN1Q9UL63 735 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF443Q9Y2A4 671 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 CHST2Q9Y4C5 530 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 DCHS1Q96JQ0 3298 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 ALAS2P22557 587 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 POU1F1P28069 291 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 OR3A3P47888 321 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 ST3GAL3Q11203 375 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 TARDBPQ13148 414 aaKnown RBP eCLIP12.81□□□□□ -0.366e-13■■□□□ 12
CSNK1E-201ENST00000359867 C1orf94Q6P1W5 598 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF619Q8N2I2 560 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 MORN4Q8NDC4 146 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 DEPDC7Q96QD5 511 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 NUAK2Q9H093 628 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 POLR2J3Q9H1A7 115 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 EXOSC4Q9NPD3 245 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 SERTAD3Q9UJW9 196 aa12.81□□□□□ -0.36
CSNK1E-201ENST00000359867 SH3D21A4FU49 640 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 CLDN4O14493 209 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF749O43361 778 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 OR10H2O60403 315 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 PTTG1O95997 202 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 GUSBP08236 651 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 CCNYL3P0C7X3 344 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 GSTM3P21266 225 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 RPS4Y1P22090 263 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 AZGP1P25311 298 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 IFNGR2P38484 337 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 AVPR1BP47901 424 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 LIMK1P53667 647 aa12.8□□□□□ -0.36
CSNK1E-201ENST00000359867 TAS2R41P59536 307 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms