RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ADCYAP1R1P41586 468 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 MCCD1P59942 119 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ACSM3Q53FZ2 586 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OSTM1Q86WC4 334 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 LRRC56Q8IYG6 542 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 METTL21AQ8WXB1 218 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 PTCHD1Q96NR3 888 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 MEGF11A6BM72 1044 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TGOLN2O43493 480 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GPR32O75388 356 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TNFRSF1BP20333 461 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CSNK2A1P68400 391 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 NFATC2Q13469 925 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SLC16A13Q7RTY0 426 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 FAM86B1Q8N7N1 296 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CSNK2A3Q8NEV1 391 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 HHATLQ9HCP6 504 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 UBE2J1Q9Y385 318 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 B3GALT1Q9Y5Z6 326 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 C1QTNF3-AMACRE9PGA6 284 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SLC35G6P0C7Q6 338 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 AMD1P17707 334 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ANXA7P20073 488 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CDKN1CP49918 316 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ITPRIPL2Q3MIP1 535 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 UGT3A2Q3SY77 523 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 UQCC3Q6UW78 93 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 LYPD8Q6UX82 237 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 KANSL1Q7Z3B3 1105 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CDH26Q8IXH8 852 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 GPR135Q8IZ08 494 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 LCN9Q8WX39 176 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 LINC00052Q96N35 136 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 EPHA6Q9UF33 1036 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM82A0PJX8 343 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 PI15O43692 258 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 LILRA4P59901 499 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 RPS24P62847 133 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 HENMT1Q5T8I9 393 aaKnown RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF551Q7Z340 670 aaPredicted RBP5.72□□□□□ -1.49
VPS13B-203ENST00000358544 RIMKLAQ8IXN7 391 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ACVR1CQ8NER5 493 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 OR52N1Q8NH53 320 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 RNF170Q96K19 258 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF559Q9BR84 538 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CLMPQ9H6B4 373 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 IL21RQ9HBE5 538 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 TRABD2BA6NFA1 517 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 CXCR1P25024 350 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 SMOQ99835 787 aa5.72□□□□□ -1.49
VPS13B-203ENST00000358544 A0A1B0GUH1 482 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 GNRHRP30968 328 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 CLCN7P51798 805 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 PDZD11Q5EBL8 140 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 SLC22A15Q8IZD6 547 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 TMED6Q8WW62 240 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 LIPCP11150 499 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 NQO2P16083 231 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 SDC1P18827 310 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 AKT2P31751 481 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 TAGLN2P37802 199 aaKnown RBP5.71□□□□□ -1.49
VPS13B-203ENST00000358544 SOX9P48436 509 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 SEMA3BQ13214 749 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 GPR50Q13585 617 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 IRF4Q15306 451 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 TAF1CQ15572 869 aaPredicted RBP5.71□□□□□ -1.49
VPS13B-203ENST00000358544 HYAL4Q2M3T9 481 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 PGGHGQ32M88 737 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 CLECL1Q8IZS7 167 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM169Q96HH4 297 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 CRLF2Q9HC73 371 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 GRHPRQ9UBQ7 328 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 BLOC1S5-TXNDC5H3BN57 136 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 PPP6CO00743 305 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 TCAPO15273 167 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 RAB40ALP0C0E4 278 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 SEMG2Q02383 582 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 AWAT2Q6E213 333 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 OTOP2Q7RTS6 562 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 C6orf120Q7Z4R8 191 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 MEX3DQ86XN8 651 aaKnown RBP5.71□□□□□ -1.49
VPS13B-203ENST00000358544 NLGN4XQ8N0W4 816 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 RAB40AQ8WXH6 277 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 OR11A1Q9GZK7 315 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 ADAP2Q9NPF8 381 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 RNF215Q9Y6U7 377 aa5.71□□□□□ -1.49
VPS13B-203ENST00000358544 BCL9O00512 1426 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 TCRBV5S2A0A599 114 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 GPR39O43194 453 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ACRV1P26436 265 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 HOXA1P49639 335 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF140P52738 457 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-203ENST00000358544 PTPRCAPQ14761 206 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 COL19A1Q14993 1142 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 ARL6IP1Q15041 203 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 RANBP10Q6VN20 620 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 GPR150Q8NGU9 434 aa5.71□□□□□ -1.5
VPS13B-203ENST00000358544 C16orf78Q8WTQ4 265 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms