RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CASP6P55212 293 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 SLC26A5P58743 744 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 ABHD17BQ5VST6 288 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 AGAP6Q5VW22 663 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 CSNK2A3Q8NEV1 391 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 CDS1Q92903 461 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 AGAP4Q96P64 663 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 OR5B12Q96R08 314 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 OR2M2Q96R28 347 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 UHRF1Q96T88 793 aaPredicted RBP11.01□□□□□ -0.65
COL9A1-202ENST00000357250 OR51J1Q9H342 316 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 DDX31Q9H8H2 851 aaKnown RBP11.01□□□□□ -0.65
COL9A1-202ENST00000357250 CBLCQ9ULV8 474 aa11.01□□□□□ -0.65
COL9A1-202ENST00000357250 A6NLC8 198 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 AKR1C4P17516 323 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 RBMS1P29558 406 aaKnown RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 KCNJ10P78508 379 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ILKQ13418 452 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 PDE7AQ13946 482 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 HSF5Q4G112 596 aaPredicted RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 ENTPD8Q5MY95 495 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 HENMT1Q5T8I9 393 aaKnown RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 ADAMTSL4Q6UY14 1074 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 MISPQ8IVT2 679 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 CYB561A3Q8NBI2 242 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 NAXEQ8NCW5 288 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 MZB1Q8WU39 189 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 CENPOQ9BU64 300 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 CD207Q9UJ71 328 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 SLC16A6O15403 523 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 NARSO43776 548 aaKnown RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 TFP02787 698 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 HTR2BP41595 481 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ALDH3B2P48448 385 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 MZT1Q08AG7 82 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 GPR50Q13585 617 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 CNN3Q15417 329 aaKnown RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF542PQ5EBM4 170 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF322Q6U7Q0 402 aaPredicted RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 RETREG3Q86VR2 466 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 TMEM102Q8N9M5 508 aaPredicted RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 OR14K1Q8NGZ2 314 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 TBC1D20Q96BZ9 403 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF486Q96H40 463 aaPredicted RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 CPNE7Q9UBL6 633 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 FTSJ1Q9UET6 329 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 EEF1E1-BLOC1S5C9J1V9 151 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 KCNK5O95279 499 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 APOC3P02656 99 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 RAC2P15153 192 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ARSAP15289 507 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 GABRA5P31644 462 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 RAB38P57729 211 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 CLVS2Q5SYC1 327 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 SLCO4C1Q6ZQN7 724 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 CLDN22Q8N7P3 220 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 GALNT6Q8NCL4 622 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 OR14L1PQ8NHC6 308 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 RNF128Q8TEB7 428 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 HRASLS5Q96KN8 279 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 GON7Q9BXV9 100 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 EIF5A2Q9GZV4 153 aaKnown RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 OR10A5Q9H207 317 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 OR10A2Q9H208 303 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 TMEM38AQ9H6F2 299 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF160Q9HCG1 818 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ZNF334Q9HCZ1 680 aaPredicted RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 PARPBPQ9NWS1 579 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ARAP2Q8WZ64 1704 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 UBR3Q6ZT12 1888 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 GAPDHSO14556 408 aaPredicted RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 OPRD1P41143 372 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 SOX3P41225 446 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 XCR1P46094 333 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 ARF3P61204 181 aaPredicted RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 ARF1P84077 181 aaKnown RBP11□□□□□ -0.65
COL9A1-202ENST00000357250 OR1Q1Q15612 314 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 BCL7AQ4VC05 210 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 DESI1Q6ICB0 168 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 OR52R1Q8NGF1 315 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 OR2A12Q8NGT7 310 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 FGF13Q92913 245 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 EGLN2Q96KS0 407 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 COQ10AQ96MF6 247 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 CHRDQ9H2X0 955 aa11□□□□□ -0.65
COL9A1-202ENST00000357250 MCM3APO60318 1980 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 COL4A5P29400 1685 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 A0A0A6YYC8 382 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 HIDE1A8MVS5 230 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 I3L1I5 382 aaPredicted RBP10.99□□□□□ -0.65
COL9A1-202ENST00000357250 OR7A17O14581 309 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 SEC14L2O76054 403 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 TFAP2AP05549 437 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 MAOAP21397 527 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 IMPA1P29218 277 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 AKR1C2P52895 323 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 NIPAL3Q6P499 406 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 TCTN2Q96GX1 697 aa10.99□□□□□ -0.65
COL9A1-202ENST00000357250 NKX2-4Q9H2Z4 354 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms