RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 C15orf39Q6ZRI6 1047 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 PPP1R3BQ86XI6 285 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 TMEM25Q86YD3 366 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RNF113BQ8IZP6 322 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 WDTC1Q8N5D0 677 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 OR7G3Q8NG95 312 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 OR52E1Q8NGJ3 308 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 FRZBQ92765 325 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 BPIFA2Q96DR5 249 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZMYND19Q96E35 227 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 DNAJA3Q96EY1 480 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 UHRF1Q96T88 793 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 GORASP2Q9H8Y8 452 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 KCNIP2Q9NS61 270 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 POT1Q9NUX5 634 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 GNG13Q9P2W3 67 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CAMK2AQ9UQM7 478 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 PRSS38A1L453 326 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 A6NHS1 94 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 DRGXA6NNA5 263 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 A8MVM7 634 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NUDT21O43809 227 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 CDK1P06493 297 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 XCR1P46094 333 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ARSDP51689 593 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MRPS21P82921 87 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 C3orf38Q5JPI3 329 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 LPCAT3Q6P1A2 487 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 TSSK4Q6SA08 328 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MOB3CQ70IA8 216 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 BPHLQ86WA6 291 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 SLC43A2Q8N370 569 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 IQCF1Q8N6M8 205 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ACOT4Q8N9L9 421 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CHST14Q8NCH0 376 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NLGN4YQ8NFZ3 816 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 PSMF1Q92530 271 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NT5C3BQ969T7 300 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CIDECQ96AQ7 238 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 ELP4Q96EB1 424 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 COQ10AQ96MF6 247 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ANKRD19PQ9H560 264 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NT5DC2Q9H857 520 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 DCAF13Q9NV06 445 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 MED17Q9NVC6 651 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 TMEM181Q9P2C4 612 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MOKQ9UQ07 419 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RPH3AQ9Y2J0 694 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 EMC9Q9Y3B6 208 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 PCDHGA7Q9Y5G6 932 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MYOM1P52179 1685 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 SHPRHQ149N8 1683 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 H7C1Q1 480 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 PIP5K1CO60331 668 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CLN5O75503 358 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 TK1P04183 234 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 HEXAP06865 529 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RPS17P08708 135 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 DEFB133Q30KQ1 61 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 EXOSC6Q5RKV6 272 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF684Q5T5D7 378 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CD300LGQ6UXG3 332 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MEX3BQ6ZN04 569 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 CMIPQ8IY22 773 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF679Q8IYX0 411 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MFSD9Q8NBP5 474 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 SDR9C7Q8NEX9 313 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 IL17RDQ8NFM7 739 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CDS1Q92903 461 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MIB2Q96AX9 1013 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 SGK3Q96BR1 496 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 BOCQ9BWV1 1114 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 EGLN3Q9H6Z9 239 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 LUZP4Q9P127 313 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MON2Q7Z3U7 1717 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 DCDC2BA2VCK2 349 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NKX6-3A6NJ46 265 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF705FA8MVS1 300 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 M0R3H8 397 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MRPL33O75394 65 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 SNAPINO95295 136 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF705DP0CH99 300 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF705BP0CI00 300 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 PRPH2P23942 346 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 HOXC8P31273 242 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 IL2RGP31785 369 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RAB38P57729 211 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CXCR4P61073 352 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 YPEL5P62699 121 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 MFGE8Q08431 387 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 RUNX2Q13950 521 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NFATC4Q14934 902 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 C6orf132Q5T0Z8 1188 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 RPL22L1Q6P5R6 122 aaKnown RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 METAP1DQ6UB28 335 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 RANBP10Q6VN20 620 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 NAA40Q86UY6 237 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 LRRC28Q86X40 367 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms