RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 HNRNPA1L2Q32P51 320 aaKnown RBP12.41□□□□□ -0.42
NCDN-201ENST00000356090 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 VASNQ6EMK4 673 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 PSRC1Q6PGN9 363 aaPredicted RBP12.41□□□□□ -0.42
NCDN-201ENST00000356090 ZNF687Q8N1G0 1237 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 OR52E1Q8NGJ3 308 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 OR14A2Q96R54 314 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 DDOQ99489 341 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 C1QTNF2Q9BXJ5 285 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 WASH6PQ9NQA3 447 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 XIRP2A4UGR9 3374 aa12.41□□□□□ -0.42
NCDN-201ENST00000356090 A0A1W2PPV9 198 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 SEC14L5O43304 696 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 SOX30O94993 753 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 HLA-DQB1P01920 261 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 AP2S1P53680 142 aaPredicted RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 DUSP5Q16690 384 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 METRNLQ641Q3 311 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ZNF836Q6ZNA1 936 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 C10orf53Q8N6V4 93 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 OR2L5Q8NG80 312 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 NXPE2Q96DL1 559 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ERMAPQ96PL5 475 aaPredicted RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 TEAD3Q99594 435 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 SEC22CQ9BRL7 303 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ZBP1Q9H171 429 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 FBXO34Q9NWN3 711 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 NFKBIL1Q9UBC1 381 aaPredicted RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 KCNN3Q9UGI6 736 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 NUBP2Q9Y5Y2 271 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 TP53BP1Q12888 1972 aaPredicted RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 IGKV1-8A0A0C4DH67 115 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 EDDM13A0A1B0GTR0 161 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ACOD1A6NK06 481 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 EFEMP2O95967 443 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 FAM157BP0CG42 384 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ZNF888P0CJ79 500 aaPredicted RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 SOX2P48431 317 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 SGCGQ13326 291 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 NNATQ16517 81 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 DECR1Q16698 335 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 MRPL2Q5T653 305 aaKnown RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 SLC48A1Q6P1K1 146 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ANGPTL6Q8NI99 470 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 LGALS14Q8TCE9 139 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 THAP4Q8WY91 577 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 BPIFA2Q96DR5 249 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 LRRC3BQ96PB8 259 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 DERL3Q96Q80 235 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 AICDAQ9GZX7 198 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.4□□□□□ -0.42
NCDN-201ENST00000356090 MGAT4CQ9UBM8 478 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 DPP7Q9UHL4 492 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 DUXAA6NLW8 204 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 TSPAN9O75954 239 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 THY1P04216 161 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 WNT1P04628 370 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 RLN1P04808 185 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ZNF3P17036 446 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ATF1P18846 271 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 NPR2P20594 1047 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 CTNNB1P35222 781 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 BLVRAP53004 296 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 BTG1P62324 171 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 EFNB1P98172 346 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 FOXK2Q01167 660 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ZNF77Q15935 545 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 TRMT12Q53H54 448 aaKnown RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 RFLNBQ8N5W9 214 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 OR8K3Q8NH51 312 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 COQ8AQ8NI60 647 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 LCN9Q8WX39 176 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 ELMOD3Q96FG2 381 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 PTCHD1Q96NR3 888 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 MRPS18AQ9NVS2 196 aaKnown RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 APOBEC3BQ9UH17 382 aaKnown RBP12.4□□□□□ -0.42
NCDN-201ENST00000356090 MED31Q9Y3C7 131 aa12.4□□□□□ -0.42
NCDN-201ENST00000356090 TCF20Q9UGU0 1960 aaKnown RBP12.4□□□□□ -0.43
NCDN-201ENST00000356090 TRABD2BA6NFA1 517 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 GPR171O14626 319 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 RGS11O94810 467 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 HPXP02790 462 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 F3P13726 295 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 HSD17B2P37059 387 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 GDNFP39905 211 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 ARHGAP19Q14CB8 494 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 OR1Q1Q15612 314 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 RNF44Q7L0R7 432 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.39□□□□□ -0.43
NCDN-201ENST00000356090 TTLQ8NG68 377 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 C1orf216Q8TAB5 229 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 HSD17B8Q92506 261 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 SIPA1Q96FS4 1042 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 SOSTQ9BQB4 213 aa12.39□□□□□ -0.43
NCDN-201ENST00000356090 GINS4Q9BRT9 223 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms