RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ESPNLQ6ZVH7 1005 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 RNF130Q86XS8 419 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 TMCO5AQ8N6Q1 288 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 ANKFN1Q8N957 763 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 ZNF527Q8NB42 609 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 FAM71CQ8NEG0 241 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 OR9I1Q8NGQ6 314 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 OR5W2Q8NH69 310 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 RNF128Q8TEB7 428 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 NINJ1Q92982 152 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 DNAJA3Q96EY1 480 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 GMPPAQ96IJ6 420 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 MAELQ96JY0 434 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 THUMPD3Q9BV44 507 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 HOXD1Q9GZZ0 328 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 SAP130Q9H0E3 1048 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 C12orf49Q9H741 205 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 PLSCR4Q9NRQ2 329 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 THAP1Q9NVV9 213 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 ITPR3Q14573 2671 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 HDAC3O15379 428 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 STX11O75558 287 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 CYP7B1O75881 506 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 TUBBP07437 444 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 CHRM4P08173 479 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 UBTFL6P0CB48 400 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 CD1EP15812 388 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 CD53P19397 219 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 ENPP1P22413 925 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 AGTR1P30556 359 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 S100A3P33764 101 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 PGM1P36871 562 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 MVDP53602 400 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 SUMO3P55854 103 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 CHRNEQ04844 493 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 FGFBP1Q14512 234 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 TSC22D1Q15714 1073 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 SYPL1Q16563 259 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 STAC2Q6ZMT1 411 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 LRRC34Q8IZ02 419 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 PNPT1Q8TCS8 783 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 ROPN1LQ96C74 230 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 PRRG4Q9BZD6 226 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 KLHL4Q9C0H6 718 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 BTNL2Q9UIR0 455 aa14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 GPC6Q9Y625 555 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-201ENST00000355572 EIF4E2O60573 245 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 SNUPNO95149 360 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 CSTAP01040 98 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 FCGR2AP12318 317 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 CRYGSP22914 178 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 ELK4P28324 431 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 SLC18A1P54219 525 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 CARD18P57730 90 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 SESN3P58005 492 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 EEF1A1P68104 462 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 ANXA8L1Q5VT79 327 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 EEF1A1P5Q5VTE0 462 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 FBXW10Q5XX13 1052 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 DNAJC14Q6Y2X3 702 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 C16orf62Q7Z3J2 963 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 SPATA19Q7Z5L4 167 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 TUSC5Q8IXB3 177 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 OR6K3Q8NGY3 331 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 TMUB1Q9BVT8 246 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 LAT2Q9GZY6 243 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 SLC38A1Q9H2H9 487 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 MANSC1Q9H8J5 431 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 MCTS1Q9ULC4 181 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 WDR45Q9Y484 360 aa14.91□□□□□ -0.02
PDLIM7-201ENST00000355572 CCDC154A6NI56 674 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 AP3D1O14617 1153 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 SYNGR4O95473 234 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 RAF1P04049 648 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 PGRP06401 933 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 ADH6P28332 368 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 EIF1P41567 113 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 PCYT1AP49585 367 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 CLNS1AP54105 237 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 TIGD2Q4W5G0 525 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 TTMPQ5BVD1 217 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 AP1ARQ63HQ0 302 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 BHLHB9Q6PI77 547 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 CROCCP2Q86T23 111 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 CXorf67Q86X51 503 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 ZNF619Q8N2I2 560 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 ZFP90Q8TF47 636 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 CNOT9Q92600 299 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 ZNF75CPQ92670 426 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 PIK3IP1Q96FE7 263 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 MRGPRX4Q96LA9 322 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 OR52E6Q96RD3 313 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 ELOVL5Q9NYP7 299 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 PCDHGB4Q9UN71 923 aa14.9□□□□□ -0.02
PDLIM7-201ENST00000355572 DUXAA6NLW8 204 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 C16orf97H3BN30 126 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 H3BNH8 94 aa14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 SMAD9O15198 467 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-201ENST00000355572 KLF4O43474 513 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms