RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RFLNAQ6ZTI6 216 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 MOB3CQ70IA8 216 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 CLMPQ9H6B4 373 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 OBP2BQ9NPH6 170 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 UBQLN4Q9NRR5 601 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 AP1M2Q9Y6Q5 423 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 CPOXP36551 454 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 PPP5CP53041 499 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 SLC22A6Q4U2R8 563 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 MFSD9Q8NBP5 474 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 OR56B2PQ8NGI1 322 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 ACOT11Q8WXI4 607 aaPredicted RBP12.37□□□□□ -0.43
SCN8A-202ENST00000355133 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
SCN8A-202ENST00000355133 ARRDC3Q96B67 414 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 DVL2O14641 736 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 SLC22A5O76082 557 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 F13BP05160 661 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 FAM83FQ8NEG4 500 aaPredicted RBP12.37□□□□□ -0.43
SCN8A-202ENST00000355133 OR5D14Q8NGL3 314 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 INTS6Q9UL03 887 aaKnown RBP12.37□□□□□ -0.43
SCN8A-202ENST00000355133 LOC102725191A0A1B0GVB3 256 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 BOLA2-SMG1P6H3BVE0 249 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 LUMP51884 338 aaPredicted RBP12.37□□□□□ -0.43
SCN8A-202ENST00000355133 INHBCP55103 352 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 PRDX1Q06830 199 aaKnown RBP12.37□□□□□ -0.43
SCN8A-202ENST00000355133 SPOCK1Q08629 439 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 CNN3Q15417 329 aaKnown RBP12.37□□□□□ -0.43
SCN8A-202ENST00000355133 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 ADGRG5Q8IZF4 528 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 TCTN2Q96GX1 697 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF681Q96N22 645 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 ATOH8Q96SQ7 321 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 EMC3Q9P0I2 261 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 SLC6A5Q9Y345 797 aa12.37□□□□□ -0.43
SCN8A-202ENST00000355133 A6NIN4 97 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 CENPBD1B2RD01 187 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ZBTB42B2RXF5 422 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 LIPCP11150 499 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 SERPINA2P20848 420 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 CA5AP35218 305 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF322Q6U7Q0 402 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 C19orf47Q8N9M1 422 aaKnown RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 PIGCQ92535 297 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 TOX2Q96NM4 488 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 PBDC1Q9BVG4 233 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 MMP28Q9H239 520 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 PRSS16Q9NQE7 514 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 TMEM45AQ9NWC5 275 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 UBFD1O14562 309 aaKnown RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 B4GAT1O43505 415 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 SC5DO75845 299 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ANKRD54Q6NXT1 300 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 PAQR9Q6ZVX9 377 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 GDPD1Q8N9F7 314 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 SSX3Q99909 188 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 TEX10Q9NXF1 929 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 MED16Q9Y2X0 877 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF736B4DX44 427 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 SIGLEC6O43699 453 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF44P15621 663 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 HBA1P69905 142 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 OPN5Q6U736 354 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 KLHDC9Q8NEP7 349 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 OR4D6Q8NGJ1 314 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 LKAAEAR1Q8TD35 194 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ULBP2Q9BZM5 246 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 DYNLRB1Q9NP97 96 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 SIT1Q9Y3P8 196 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 SETD1AO15047 1707 aaKnown RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 IGHG1P01857 330 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 CD46P15529 392 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ADRA1AP35348 466 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 KRBOX4Q5JUW0 171 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 PRAMEF20Q5VT98 475 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 PDZD9Q8IXQ8 264 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 MMP21Q8N119 569 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 OR2B2Q9GZK3 357 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ARNTLO00327 626 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ACPPP15309 386 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 PTPN6P29350 595 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 GABRA2P47869 451 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 GARNL3Q5VVW2 1013 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 MEPCEQ7L2J0 689 aaKnown RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 KIF18BQ86Y91 864 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 GTPBP8Q8N3Z3 284 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ZFAND2BQ8WV99 257 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 C22orf15Q8WYQ4 148 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF845Q96IR2 970 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 OR6C1Q96RD1 312 aa12.36□□□□□ -0.43
SCN8A-202ENST00000355133 ZNF587Q96SQ5 575 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-202ENST00000355133 TP53TG5Q9Y2B4 290 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms