RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SOCS6O14544 535 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 SLC31A2O15432 143 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 LATS1O95835 1130 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 IGHA1P01876 353 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 RLN1P04808 185 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 ATP1B1P05026 303 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 ACVR1BP36896 505 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 SEMG2Q02383 582 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 RPE65Q16518 533 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 PLEKHN1Q494U1 663 aaPredicted RBP12.33□□□□□ -0.44
IFT88-202ENST00000351808 UBE2R2Q712K3 238 aaPredicted RBP12.33□□□□□ -0.44
IFT88-202ENST00000351808 CAMKMTQ7Z624 323 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.33□□□□□ -0.44
IFT88-202ENST00000351808 CFAP52Q8N1V2 620 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 OR5W2Q8NH69 310 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 SMAP2Q8WU79 429 aaPredicted RBP12.33□□□□□ -0.44
IFT88-202ENST00000351808 SLC38A5Q8WUX1 472 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 ALX4Q9H161 411 aaPredicted RBP12.33□□□□□ -0.44
IFT88-202ENST00000351808 ASB8Q9H765 288 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 TCF7L1Q9HCS4 588 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 PCDHGA1Q9Y5H4 931 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 TRAV14DV4A0A0A6YYC5 116 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 KANTRA0A1W2PQU2 76 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ZNF705EA8MWA4 302 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 NEDD8-MDP1E9PL57 170 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 NDUFB6O95139 128 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 PCDH8O95206 1070 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 FARS2O95363 451 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 ANXA2P07355 339 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 APEHP13798 732 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 ZNF8P17098 575 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 ARSIQ5FYB1 569 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 XKR4Q5GH76 650 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 AADACL4Q5VUY2 407 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 CD300LDQ6UXZ3 194 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 CXXC5Q7LFL8 322 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 MON1AQ86VX9 555 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 MUC20Q8N307 709 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 OR10H5Q8NGA6 315 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 LGALS14Q8TCE9 139 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 TNFAIP8L1Q8WVP5 186 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 RAB8BQ92930 207 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 RFKQ969G6 155 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 CNTNAP3BQ96NU0 1288 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 EDEM2Q9BV94 578 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 TRMT61BQ9BVS5 477 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 FNDC11Q9BVV2 318 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.32□□□□□ -0.44
IFT88-202ENST00000351808 OR51I1Q9H343 314 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 IL17CQ9P0M4 197 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 RFPL4AA6NLU0 287 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 RFPL4AL1F8VTS6 287 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 KRT33AO76009 404 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 SAGP10523 405 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 EPXP11678 715 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 MAT2AP31153 395 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 NSG1P42857 185 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 NUBP1P53384 320 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 AP3S2P59780 193 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 CHAF1BQ13112 559 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 NFATC2Q13469 925 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 NDUFA9Q16795 377 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 JMJD6Q6NYC1 403 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 PLBD1Q6P4A8 553 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 SERPINA13PQ6UXR4 307 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ETV3LQ6ZN32 361 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ZNF614Q8N883 585 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 DNAAF1Q8NEP3 725 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ALG8Q9BVK2 526 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 EXOGQ9Y2C4 368 aaKnown RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 NPFFR2Q9Y5X5 522 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 A0A0A6YYC8 382 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 TMEM272A0A1B0GTI8 110 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 FAM183AA6NL82 134 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 I3L1I5 382 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 SLC2A10O95528 541 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 TBX18O95935 607 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 SERPIND1P05546 499 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ZNF14P17017 642 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 SMIM11AP58511 58 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 STARD6P59095 220 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 TAS2R60P59551 318 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 RAB2AP61019 212 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 EFEMP1Q12805 493 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 IL10RAQ13651 578 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 CLINT1Q14677 625 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 TMEM44Q2T9K0 475 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 TIGD5Q53EQ6 642 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 ACSM3Q53FZ2 586 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 C1orf94Q6P1W5 598 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 CERS6Q6ZMG9 384 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 DNAJB7Q7Z6W7 309 aaPredicted RBP12.32□□□□□ -0.44
IFT88-202ENST00000351808 HMGN2P46Q86SG4 172 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 LRRTM1Q86UE6 522 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 COMTD1Q86VU5 262 aa12.32□□□□□ -0.44
IFT88-202ENST00000351808 NKAIN4Q8IVV8 208 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms