RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TNFSF15O95150 251 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 NADKO95544 446 aaPredicted RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 NTN1O95631 604 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 CRHBPP24387 322 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 TEKQ02763 1124 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 PRKCDQ05655 676 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 SSPNQ14714 243 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 SLX4IPQ5VYV7 408 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 DESI1Q6ICB0 168 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 WBP2NLQ6ICG8 309 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 C16orf47Q6ZP98 133 aaPredicted RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 NLGN4XQ8N0W4 816 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 SLC15A4Q8N697 577 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 AMER2Q8N7J2 671 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 NLGN4YQ8NFZ3 816 aaPredicted RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 OR11G2Q8NGC1 345 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 TEX47Q8TBZ9 253 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 ARSGQ96EG1 525 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 RASSF1Q9NS23 344 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 EXPH5Q8NEV8 1989 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 A6NHS1 94 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 C21orf140B9A014 251 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 KLF4O43474 513 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 CSRP1P21291 193 aaKnown RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 EEF1B2P24534 225 aaKnown RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 GPR4P46093 362 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 RPL5P46777 297 aaKnown RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 GTF2A1P52655 376 aaPredicted RBP17.1■□□□□ 0.33
PTN-201ENST00000348225 CSNK2BP67870 215 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 CASP12Q6UXS9 341 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 NUP54Q7Z3B4 507 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 MARCH3Q86UD3 253 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 P3H2Q8IVL5 708 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 TTC9Q92623 222 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 NACC2Q96BF6 587 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 ZNF426Q9BUY5 554 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 GPR87Q9BY21 358 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 SCN3BQ9NY72 215 aa17.1■□□□□ 0.33
PTN-201ENST00000348225 DPPA5A6NC42 116 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 OIP5O43482 229 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 HCRTR2O43614 444 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 IFI30P13284 250 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 OTX2P32243 289 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 NR1H2P55055 460 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 CDH15P55291 814 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 CTBP2P56545 445 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 FBXW4P57775 412 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 ZNF117Q03924 483 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 DNASE1L3Q13609 305 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 BROXQ5VW32 411 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 TMEM236Q5W0B7 351 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 LAIR2Q6ISS4 152 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 CBLN3Q6UW01 205 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 PPP1R32Q7Z5V6 425 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 TMPRSS12Q86WS5 348 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 CLDN22Q8N7P3 220 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 BPIFB6Q8NFQ5 453 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 RHOXF1Q8NHV9 184 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 TPRKBQ9Y3C4 175 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 SDK2Q58EX2 2172 aa17.09■□□□□ 0.33
PTN-201ENST00000348225 KPNA4O00629 521 aaPredicted RBP17.08■□□□□ 0.32
PTN-201ENST00000348225 SCO2O43819 266 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 OR2J2O76002 312 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 IGFBP1P08833 259 aaPredicted RBP17.08■□□□□ 0.32
PTN-201ENST00000348225 PNMTP11086 282 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 ICAM2P13598 275 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 SMSP52788 366 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 RPS18P62269 152 aaKnown RBP17.08■□□□□ 0.32
PTN-201ENST00000348225 C12orf73Q69YU5 71 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 ZNF773Q6PK81 442 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 LINC00114Q6XXX2 140 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 MEX3DQ86XN8 651 aaKnown RBP17.08■□□□□ 0.32
PTN-201ENST00000348225 PFN4Q8NHR9 129 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 ZNF563Q8TA94 476 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 OSTF1Q92882 214 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 HGDQ93099 445 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 C3orf49Q96BT1 292 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 BPIFA2Q96DR5 249 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 SH3YL1Q96HL8 342 aaPredicted RBP17.08■□□□□ 0.32
PTN-201ENST00000348225 PRRG3Q9BZD7 231 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 SLC25A19Q9HC21 320 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 ZNF160Q9HCG1 818 aa17.08■□□□□ 0.32
PTN-201ENST00000348225 RYDENQ9NUL5 291 aaKnown RBP17.08■□□□□ 0.32
PTN-201ENST00000348225 A0A087WUJ7 227 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 UNC119BA6NIH7 251 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 TRIM64CA6NLI5 447 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 STMND1H3BQB6 276 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 RAD1O60671 282 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 ZNF354AO60765 605 aaPredicted RBP17.07■□□□□ 0.32
PTN-201ENST00000348225 TFAP2AP05549 437 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 FBXO45P0C2W1 286 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 PGCP20142 388 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 FMO3P31513 532 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 DLSTP36957 453 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 CBFBQ13951 182 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 GINS1Q14691 196 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 SLC27A4Q6P1M0 643 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 PTCHD4Q6ZW05 846 aa17.07■□□□□ 0.32
PTN-201ENST00000348225 TMPRSS11FQ6ZWK6 438 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms