RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 HLA-CQ95604 372 aa19.74■□□□□ 0.75
PTPN18-202ENST00000347849 ACTRT3Q9BYD9 372 aa19.74■□□□□ 0.75
PTPN18-202ENST00000347849 RBCK1Q9BYM8 510 aa19.74■□□□□ 0.75
PTPN18-202ENST00000347849 SLC23A1Q9UHI7 598 aa19.74■□□□□ 0.75
PTPN18-202ENST00000347849 SLC9A8Q9Y2E8 581 aa19.74■□□□□ 0.75
PTPN18-202ENST00000347849 CDH10Q9Y6N8 788 aa19.74■□□□□ 0.75
PTPN18-202ENST00000347849 A0A0G2JPF8 293 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 CENPVL1A0A0U1RR11 272 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 HNRNPCL2B2RXH8 293 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 HNRNPCL3B7ZW38 293 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 SDC3O75056 442 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 HNRNPCL4P0DMR1 293 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 SLC1A3P43003 542 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 MINDY4Q4G0A6 757 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 CCNJQ5T5M9 372 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 USP53Q70EK8 1073 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 ZNF767PQ75MW2 155 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 Q7L0L9 218 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 CA13Q8N1Q1 262 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 DTX3Q8N9I9 347 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 OR9A4Q8NGU2 314 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 IRGMA1A4Y4 181 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 MEN1O00255 615 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 GABRPO00591 440 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 RDH16O75452 317 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 UQCRC1P31930 480 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 IFNA8P32881 189 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 AGFG1P52594 562 aaKnown RBP19.73■□□□□ 0.75
PTPN18-202ENST00000347849 CSTF1Q05048 431 aaKnown RBP19.73■□□□□ 0.75
PTPN18-202ENST00000347849 DUSP5Q16690 384 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 PRICKLE2Q7Z3G6 844 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 SIX5Q8N196 739 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 OR2L13Q8N349 312 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 ZNF485Q8NCK3 441 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 OR8D4Q8NGM9 314 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 CCDC3Q9BQI4 270 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 HDHD2Q9H0R4 259 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 SEMA6CQ9H3T2 930 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 COLQQ9Y215 455 aaPredicted RBP19.73■□□□□ 0.75
PTPN18-202ENST00000347849 NTNG1Q9Y2I2 539 aa19.73■□□□□ 0.75
PTPN18-202ENST00000347849 UBXN7O94888 489 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 NME1P15531 152 aaKnown RBP19.72■□□□□ 0.75
PTPN18-202ENST00000347849 TLX1P31314 330 aaPredicted RBP19.72■□□□□ 0.75
PTPN18-202ENST00000347849 ZNF311Q5JNZ3 666 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 MZT2AQ6P582 158 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 DGAT2L6Q6ZPD8 337 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 ARIH2OSQ8N7S6 290 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 ADAMTS15Q8TE58 950 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 AKAP1Q92667 903 aaKnown RBP eCLIP19.72■□□□□ 0.75
PTPN18-202ENST00000347849 MAP3K3Q99759 626 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 CNIH4Q9P003 139 aa19.72■□□□□ 0.75
PTPN18-202ENST00000347849 A0A087WUU8 490 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 HLA-DPB1P04440 258 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 CT62P0C5K7 136 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 RNF144AP50876 292 aaPredicted RBP19.71■□□□□ 0.75
PTPN18-202ENST00000347849 RPL6Q02878 288 aaKnown RBP19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ARMC6Q6NXE6 501 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ASB18Q6ZVZ8 466 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 C16orf62Q7Z3J2 963 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 CCDC28AQ8IWP9 274 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ARHGEF39Q8N4T4 335 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 CLIP3Q96DZ5 547 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 LYRM4Q9HD34 91 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ADAP2Q9NPF8 381 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 NTMQ9P121 344 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 VPS13AQ96RL7 3174 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 TMEM265A0A087WTH1 108 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 OR2W5A6NFC9 320 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 DVL2O14641 736 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ATXN8OSP0DMR3 200 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ELK1P19419 428 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 GSTM3P21266 225 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 CDH11P55287 796 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 DEFB133Q30KQ1 61 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ZNF791Q3KP31 576 aaPredicted RBP19.71■□□□□ 0.75
PTPN18-202ENST00000347849 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.71■□□□□ 0.75
PTPN18-202ENST00000347849 TRILQ7L0X0 811 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 LINC00471Q8N535 108 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 OTULINQ96BN8 352 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 HSPA12BQ96MM6 686 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 MS4A4EQ96PG1 132 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 SLC38A2Q96QD8 506 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 RNF32Q9H0A6 362 aa19.71■□□□□ 0.75
PTPN18-202ENST00000347849 ANXA11P50995 505 aaKnown RBP19.7■□□□□ 0.74
PTPN18-202ENST00000347849 EXOSC7Q15024 291 aaKnown RBP19.7■□□□□ 0.74
PTPN18-202ENST00000347849 FHL5Q5TD97 284 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 C19orf47Q8N9M1 422 aaKnown RBP19.7■□□□□ 0.74
PTPN18-202ENST00000347849 OR4M2Q8NGB6 313 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 OR8H1Q8NGG4 311 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 PRRC1Q96M27 445 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 FBXO34Q9NWN3 711 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 FBXL21Q9UKT6 434 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 FABP7O15540 132 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 ZNF155Q12901 538 aaPredicted RBP19.7■□□□□ 0.74
PTPN18-202ENST00000347849 FAM205BPQ63HN1 556 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 HEPHL1Q6MZM0 1159 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 FRRS1Q6ZNA5 592 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 MCATQ8IVS2 390 aaKnown RBP19.7■□□□□ 0.74
PTPN18-202ENST00000347849 TTC9Q92623 222 aa19.7■□□□□ 0.74
PTPN18-202ENST00000347849 HYLS1Q96M11 299 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms