RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 NODALQ96S42 347 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 RASL10BQ96S79 203 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 KLHDC3Q9BQ90 382 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 ADAM19Q9H013 955 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
ECM1-201ENST00000346569 ENOPH1Q9UHY7 261 aa10.05□□□□□ -0.8
ECM1-201ENST00000346569 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
ECM1-201ENST00000346569 ZAR1LA6NP61 321 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 STMND1H3BQB6 276 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 NDUFB5O43674 189 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 OR2J2O76002 312 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 TNFAIP8O95379 198 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 HPP00738 406 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 IGFBP1P08833 259 aaPredicted RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 EVI2BP34910 448 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 DLSTP36957 453 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 IFNGR2P38484 337 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 UGT2B15P54855 530 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 FBXW4P57775 412 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 GABREP78334 506 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 ZNF117Q03924 483 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 PRKCDQ05655 676 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 Q0VFX4 171 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 CHAF1BQ13112 559 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 CDK5R2Q13319 367 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 BLMHQ13867 455 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 PTGES3Q15185 160 aaKnown RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 MEP1AQ16819 746 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 ZNF791Q3KP31 576 aaPredicted RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 C6orf141Q5SZD1 244 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 Q6ZPB1 254 aaPredicted RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 RRM2BQ7LG56 351 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 HEATR5AQ86XA9 2040 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 GALNT15Q8N3T1 639 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 RHOXF1Q8NHV9 184 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 PIGXQ8TBF5 258 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 SLC22A8Q8TCC7 542 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 ADAMTS17Q8TE56 1095 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 DNAJA4Q8WW22 397 aaPredicted RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 TMEM239Q8WW34 195 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 UBE2FQ969M7 185 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 C3orf49Q96BT1 292 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 TMCO6Q96DC7 493 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 CCNL2Q96S94 520 aaPredicted RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 ZNF160Q9HCG1 818 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 ASCL3Q9NQ33 180 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 MEPEQ9NQ76 525 aaPredicted RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 ICAM5Q9UMF0 924 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 YARS2Q9Y2Z4 477 aaKnown RBP10.04□□□□□ -0.8
ECM1-201ENST00000346569 GMPPBQ9Y5P6 360 aa10.04□□□□□ -0.8
ECM1-201ENST00000346569 A0A087WUJ7 227 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 EIF4E1BA6NMX2 242 aaKnown RBP10.03□□□□□ -0.8
ECM1-201ENST00000346569 MASP2O00187 686 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 ITGA10O75578 1167 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 GSTM3P21266 225 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 FPR3P25089 353 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 MST1P26927 711 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 OTX2P32243 289 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 PTGDSP41222 190 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 RBM34P42696 430 aaKnown RBP10.03□□□□□ -0.8
ECM1-201ENST00000346569 GIPRP48546 466 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 IDH2P48735 452 aaKnown RBP10.03□□□□□ -0.8
ECM1-201ENST00000346569 NOVA1P51513 510 aaKnown RBP10.03□□□□□ -0.8
ECM1-201ENST00000346569 CTBP2P56545 445 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 MLF1P58340 268 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 CDK5Q00535 292 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 CTU2Q2VPK5 515 aaKnown RBP10.03□□□□□ -0.8
ECM1-201ENST00000346569 ALG10BQ5I7T1 473 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 WBP2NLQ6ICG8 309 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 TMEM81Q6P7N7 255 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 TTC33Q6PID6 262 aaPredicted RBP10.03□□□□□ -0.8
ECM1-201ENST00000346569 RASSF6Q6ZTQ3 369 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 TMPRSS11FQ6ZWK6 438 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 RPS19BP1Q86WX3 136 aaKnown RBP10.03□□□□□ -0.8
ECM1-201ENST00000346569 KIF18BQ86Y91 864 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 MISPQ8IVT2 679 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 NRMQ8IXM6 262 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 SETD9Q8NE22 299 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 OR5W2Q8NH69 310 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 DUSP19Q8WTR2 217 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 TBL1XR1Q9BZK7 514 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 CDCP1Q9H5V8 836 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 P4HTMQ9NXG6 502 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 IL20Q9NYY1 176 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 IL17BQ9UHF5 180 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 MYRFQ9Y2G1 1151 aa10.03□□□□□ -0.8
ECM1-201ENST00000346569 CNOT1A5YKK6 2376 aaKnown RBP10.02□□□□□ -0.8
ECM1-201ENST00000346569 TRIM64CA6NLI5 447 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 C17orf51A8MQB3 221 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 B4DXG7 233 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 CDC42EP2O14613 210 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 PIP5K1CO60331 668 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 MAN1A2O60476 641 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 PTP4A3O75365 173 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 DXOO77932 396 aaKnown RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 OR6B1O95007 311 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 GABRB1P18505 474 aa10.02□□□□□ -0.81
ECM1-201ENST00000346569 RBMS1P29558 406 aaKnown RBP10.02□□□□□ -0.81
ECM1-201ENST00000346569 SLC1A3P43003 542 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms