RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SLC35F2Q8IXU6 374 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 OR10K1Q8NGX5 313 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 STK35Q8TDR2 534 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SLC25A36Q96CQ1 311 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CMKLR1Q99788 373 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 P2RY12Q9H244 342 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RRAGCQ9HB90 399 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RLIMQ9NVW2 624 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SCML1Q9UN30 329 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ACTL7AQ9Y615 435 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM82A0PJX8 343 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 K7ERQ8 282 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TSPAN12O95859 305 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CALCBP10092 127 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RPL17P18621 184 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TSFMP43897 325 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ERVK-21P61565 698 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TNK1Q13470 666 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 DYRK1AQ13627 763 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF322Q6U7Q0 402 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 IL20RBQ6UXL0 311 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 OVCH1Q7RTY7 1134 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF551Q7Z340 670 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 OR4K13Q8NH42 304 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TRMT2BQ96GJ1 504 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SAMD11Q96NU1 681 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RSPH9Q9H1X1 276 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 IKZF5Q9H5V7 419 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TEX13DA0A0J9YY54 714 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NFKBIEO00221 500 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 S100A8P05109 93 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TPOP07202 933 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TGFBR1P36897 503 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 AQP2P41181 271 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CCL23P55773 120 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CD300CQ08708 224 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 C19orf57Q0VDD7 668 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ELAVL3Q14576 367 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 C14orf28Q4W4Y0 310 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SLC29A4Q7RTT9 530 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CAMKMTQ7Z624 323 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 MFSD4AQ8N468 514 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 HORMAD2Q8N7B1 307 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SFXN2Q96NB2 322 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SPHK2Q9NRA0 654 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SPATA6Q9NWH7 488 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF226Q9NYT6 803 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 TESQ9UGI8 421 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF443Q9Y2A4 671 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ANKRD36A6QL64 1941 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ELK1P19419 428 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CD79BP40259 229 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 OPRD1P41143 372 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MC3RP41968 323 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SEC61A1P61619 476 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PEA15Q15121 130 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ZMYND11Q15326 602 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 AANATQ16613 207 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 RTL6Q6ICC9 239 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ASPGQ86U10 573 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM200AQ86VY9 491 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM41AQ96HV5 264 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 URM1Q9BTM9 101 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SLC23A1Q9UHI7 598 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 WIF1Q9Y5W5 379 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SIP14410 1827 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 XIRP1Q702N8 1843 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CLEC3AO75596 197 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PPP1R3DO95685 299 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TSPAN15O95858 294 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PNMTP11086 282 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SLC11A1P49279 550 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 CHRFAM7AQ494W8 412 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 COX20Q5RI15 118 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ENPP7Q6UWV6 458 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SYT3Q9BQG1 590 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 FANCFQ9NPI8 374 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SNRPGP15A8MWD9 76 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 LEFTY2O00292 366 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SMAD9O15198 467 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SEC14L5O43304 696 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 LCMT2O60294 686 aaKnown RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SRCP12931 536 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 FPR3P25089 353 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MAP4K2Q12851 820 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 BAMBIQ13145 260 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ALG10Q5BKT4 473 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 OTUD1Q5VV17 481 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-203ENST00000343508 HTR3DQ70Z44 454 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TMUB2Q71RG4 321 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 WDSUB1Q8N9V3 476 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MYLIPQ8WY64 445 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 SPACA7Q96KW9 195 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 PLSCR3Q9NRY6 295 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 EPHA6Q9UF33 1036 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 MUTYHQ9UIF7 546 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM200CA6NKL6 621 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 ADH1BP00325 375 aa4.48□□□□□ -1.69
CSMD3-203ENST00000343508 LSSP48449 732 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms