RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TRAPPC2P0DI81 140 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 TRAPPC2BP0DI82 140 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 TMEM130Q8N3G9 435 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 OR1J2Q8NGS2 313 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 ASB17Q8WXJ9 295 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 OR2M2Q96R28 347 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 HIDE1A8MVS5 230 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 LGALS4P56470 323 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 WNT4P56705 351 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 VSIG10LQ86VR7 867 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 NIPA2Q8N8Q9 360 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 THAP7Q9BT49 309 aaPredicted RBP16.67■□□□□ 0.26
SMAD4-201ENST00000342988 ADGRB3O60242 1522 aa16.67■□□□□ 0.26
SMAD4-201ENST00000342988 SERTM2A0A1B0GWG4 89 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 KIAA0355O15063 1070 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 DENRO43583 198 aaKnown RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 HOXB2P14652 356 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 KIAA2026Q5HYC2 2103 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 ZNF486Q96H40 463 aaPredicted RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 SCN5AQ14524 2016 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 CLDN1O95832 211 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 OBP2BQ9NPH6 170 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 OARD1Q9Y530 152 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 OR1A2Q9Y585 309 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 AGTRAPQ6RW13 159 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 LHX6Q9UPM6 363 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 LRIT2A6NDA9 550 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 PCNX2A6NKB5 2137 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 SMLR1H3BR10 107 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 DLX3O60479 287 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 POP7O75817 140 aaKnown RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 HLA-FP30511 346 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 CNIH3Q8TBE1 160 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 SLC41A2Q96JW4 573 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 ZNF382Q96SR6 550 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 NMES1Q9C002 83 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 RPL7L1Q6DKI1 246 aaKnown RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 IRF2BP2Q7Z5L9 587 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 PXYLP1Q8TE99 480 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 CYB5D2Q8WUJ1 264 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 INPP5EQ9NRR6 644 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 ZNF44P15621 663 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 TYRP1P17643 537 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 ARL14EPQ8N8R7 260 aaPredicted RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 PIGQQ9BRB3 760 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 STXBP5LQ9Y2K9 1186 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 FOXE1O00358 373 aaPredicted RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 HNRNPH3P31942 346 aaKnown RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 ATP1B3P54709 279 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 TMEM107Q6UX40 140 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 QRSL1Q9H0R6 528 aaKnown RBP16.66■□□□□ 0.26
SMAD4-201ENST00000342988 POPDC3Q9HBV1 291 aa16.66■□□□□ 0.26
SMAD4-201ENST00000342988 ADIRFQ15847 76 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 WDR5BQ86VZ2 330 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 AKR1E2Q96JD6 320 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 DZANK1Q9NVP4 752 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 ROBO2Q9HCK4 1378 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 PRAMEF27A3QJZ7 478 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 HTRA2O43464 458 aaPredicted RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 EEDO75530 441 aaKnown RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 GDI1P31150 447 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 SLC1A3P43003 542 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 H3F3AP84243 136 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 PRAMEF9Q5VWM5 478 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 LYRM2Q9NU23 88 aaPredicted RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 B3GAT1Q9P2W7 334 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 ARG2P78540 354 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 PDE7AQ13946 482 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 IFI44Q8TCB0 444 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 KIAA1456Q9P272 454 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 GTF3C1Q12789 2109 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 SLC16A6O15403 523 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 CPN1P15169 458 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 MMP12P39900 470 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 ETV4P43268 484 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 KIR2DL3P43628 341 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 FKBP1BP68106 108 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 METTL2BQ6P1Q9 378 aaKnown RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 SOX3P41225 446 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 MBLAC2Q68D91 279 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 PRR11Q96HE9 360 aaPredicted RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 ZDHHC2Q9UIJ5 367 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 V9GYS6 101 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 JCADQ9P266 1359 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 PHOX2AO14813 284 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 TBCEQ15813 527 aaPredicted RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 OR5B3Q8NH48 314 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 RAB7BQ96AH8 199 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 CLSTN3Q9BQT9 956 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 GON7Q9BXV9 100 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 ACKR4Q9NPB9 350 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 CACFD1Q9UGQ2 172 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 SLC16A5O15375 505 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 B3GALNT1O75752 331 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 GBAP04062 536 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 HNRNPA2B1P22626 353 aaKnown RBP16.65■□□□□ 0.26
SMAD4-201ENST00000342988 PGBD5Q8N414 524 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 SAMD8Q96LT4 415 aa16.65■□□□□ 0.26
SMAD4-201ENST00000342988 HEMK1Q9Y5R4 338 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms