RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 FOXRED2Q8IWF2 684 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 ADAMTS14Q8WXS8 1223 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 C7orf34Q96L11 122 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 COQ10AQ96MF6 247 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 ADOQ96SZ5 270 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 ZNF471Q9BX82 626 aaPredicted RBP6.71□□□□□ -1.33
VCAN-202ENST00000342785 OR51J1Q9H342 316 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 SYNPO2LQ9H987 977 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 HHATLQ9HCP6 504 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 SIRT5Q9NXA8 310 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 SLC23A2Q9UGH3 650 aa6.71□□□□□ -1.33
VCAN-202ENST00000342785 IGLV3-16A0A075B6K0 115 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 A0A1W2PR48 441 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 FAM221BA6H8Z2 402 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 WASHC1A8K0Z3 465 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 ZNF878C9JN71 531 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 PPM1DO15297 605 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 NR0B1P51843 470 aaKnown RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 RIDAP52758 137 aaKnown RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 PUDPQ08623 228 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 NXNL2Q5VZ03 156 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 WASH2PQ6VEQ5 465 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 TMEM64Q6YI46 380 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 MBOAT2Q6ZWT7 520 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 RNF113BQ8IZP6 322 aaKnown RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 RLN3Q8WXF3 142 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 SNAPC3Q92966 411 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 KLHL15Q96M94 604 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 DEFB126Q9BYW3 111 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 C11orf54Q9H0W9 315 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 NKX2-4Q9H2Z4 354 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 C17orf105B2RV13 164 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 DISC1C4P0D8 188 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 C9J4A7 227 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 PRAMEF26H0Y7S4 382 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 RAD1O60671 282 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 KLK3P07288 261 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 SHC1P29353 583 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 PRKAR1BP31321 381 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 ZNF41P51814 821 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 TNFRSF17Q02223 184 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 RNASE10Q5GAN6 216 aaKnown RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 ZNF322Q6U7Q0 402 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 ZNF584Q8IVC4 421 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 OR52I1Q8NGK6 324 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 GPR148Q8TDV2 347 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 MS4A6EQ96DS6 147 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 INPP5EQ9NRR6 644 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 TESQ9UGI8 421 aaKnown RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 SDC3O75056 442 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 NCR1O76036 304 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 OLFM2O95897 454 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 CSTBP04080 98 aaKnown RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 GIFP27352 417 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 RPS5P46782 204 aaKnown RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 CTBP2P56545 445 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 HNRNPKP61978 463 aaKnown RBP eCLIP6.71□□□□□ -1.34
VCAN-202ENST00000342785 C1orf189Q5VU69 101 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 GDPD3Q7L5L3 318 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 GDF7Q7Z4P5 450 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 ZNF283Q8N7M2 679 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 NANOGP1Q8N7R0 232 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 POGLUT1Q8NBL1 392 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 TMEM255BQ8WV15 326 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 GHSRQ92847 366 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 OR52A5Q9H2C5 316 aa6.71□□□□□ -1.34
VCAN-202ENST00000342785 RANGRFQ9HD47 186 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.71□□□□□ -1.34
VCAN-202ENST00000342785 LGI1O95970 557 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PNMTP11086 282 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 S100GP29377 79 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PRSS3P35030 304 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PTH2RP49190 550 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PDX1P52945 283 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PHF19Q5T6S3 580 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 SAXO2Q658L1 398 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 METAP1DQ6UB28 335 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 PRR22Q8IZ63 422 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 MSANTD3Q96H12 275 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 NECTIN4Q96NY8 510 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 LMF1Q96S06 567 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 C8orf33Q9H7E9 229 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 ZNF226Q9NYT6 803 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 FBXL3Q9UKT7 428 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 A0A1B0GWA3 101 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 PIPP12273 146 aaPredicted RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 DRD1P21728 446 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 MAOBP27338 520 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 WNT3P56703 355 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TEKQ02763 1124 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TPRA1Q86W33 373 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 BEST4Q8NFU0 473 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 TM9SF4Q92544 642 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 KCTD12Q96CX2 325 aaKnown RBP6.7□□□□□ -1.34
VCAN-202ENST00000342785 POT1Q9NUX5 634 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 SPHK1Q9NYA1 384 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 UBQLN2Q9UHD9 624 aa6.7□□□□□ -1.34
VCAN-202ENST00000342785 ATXN7L1Q9ULK2 861 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms