RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 CLIC1O00299 241 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 SYNGR4O95473 234 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 CHRM4P08173 479 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 FCGR2AP12318 317 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 ETFAP13804 333 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 PRKCAP17252 672 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 PGM1P36871 562 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 FBXL19-AS1Q494R0 122 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 HMGN2P46Q86SG4 172 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 ZNF295-AS1Q8N0V1 137 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 OR10D3Q8NH80 312 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 OR2V1Q8NHB1 315 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 FNDC9Q8TBE3 224 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 TMEM234Q8WY98 164 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 C14orf79Q96F83 325 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 AURKBQ96GD4 344 aaPredicted RBP20.23■□□□□ 0.83
PBX1-201ENST00000340699 KLHL15Q96M94 604 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 QRSL1Q9H0R6 528 aaKnown RBP20.23■□□□□ 0.83
PBX1-201ENST00000340699 SLC38A1Q9H2H9 487 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 CELSR2Q9HCU4 2923 aa20.23■□□□□ 0.83
PBX1-201ENST00000340699 MCTS1Q9ULC4 181 aaKnown RBP20.23■□□□□ 0.83
PBX1-201ENST00000340699 CENPEQ02224 2701 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 TNFSF11O14788 317 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 ADAMDEC1O15204 470 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 TROVE2P10155 538 aaKnown RBP eCLIP20.22■□□□□ 0.83
PBX1-201ENST00000340699 IL7RP16871 459 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 SFTPDP35247 375 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 MVDP53602 400 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 CRISP3P54108 245 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 HBMQ6B0K9 141 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 CMIPQ8IY22 773 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 PEX5LQ8IYB4 626 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 CNEP1R1Q8N9A8 125 aa20.22■□□□□ 0.83
PBX1-201ENST00000340699 INTS1Q8N201 2190 aaKnown RBP20.22■□□□□ 0.83
PBX1-201ENST00000340699 A0A0J9YW62 118 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 A0A1W2PNV4 684 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 AGAP5A6NIR3 686 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 CXCL13O43927 109 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 DBIP07108 87 aaKnown RBP20.21■□□□□ 0.83
PBX1-201ENST00000340699 IL11P20809 199 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 CPA2P48052 419 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 DLX5P56178 289 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 CARD18P57730 90 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 MYBPHQ13203 477 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 RGNQ15493 299 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 SLC25A53Q5H9E4 307 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 KIF18BQ86Y91 864 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 ATP6V1C2Q8NEY4 427 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 ZNF563Q8TA94 476 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 WDR60Q8WVS4 1066 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 ST8SIA1Q92185 356 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 OSTF1Q92882 214 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 ADGRG7Q96K78 797 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 ZNF559Q9BR84 538 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 RNF122Q9H9V4 155 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 CACYBPQ9HB71 228 aaKnown RBP20.21■□□□□ 0.83
PBX1-201ENST00000340699 TIGARQ9NQ88 270 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 SERINC1Q9NRX5 453 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 JKAMPQ9P055 326 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 KCNN3Q9UGI6 736 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 PACSIN3Q9UKS6 424 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 PKDREJQ9NTG1 2253 aa20.21■□□□□ 0.83
PBX1-201ENST00000340699 MED12LQ86YW9 2145 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 ATP8B1O43520 1251 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 DNAJA2O60884 412 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 BCHEP06276 602 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 VIMP08670 466 aaKnown RBP20.2■□□□□ 0.82
PBX1-201ENST00000340699 CAPN3P20807 821 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 PPIBP23284 216 aaKnown RBP20.2■□□□□ 0.82
PBX1-201ENST00000340699 RYKP34925 604 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 SLC6A8P48029 635 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 TLE4Q04727 773 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 FADDQ13158 208 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 SELENBP1Q13228 472 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 CTU2Q2VPK5 515 aaKnown RBP20.2■□□□□ 0.82
PBX1-201ENST00000340699 TMEM176BQ3YBM2 270 aaPredicted RBP20.2■□□□□ 0.82
PBX1-201ENST00000340699 LRIF1Q5T3J3 769 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 METTL21CQ5VZV1 264 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 LUZP2Q86TE4 346 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 FAM71CQ8NEG0 241 aa20.2■□□□□ 0.82
PBX1-201ENST00000340699 REXO5Q96IC2 774 aaKnown RBP20.2■□□□□ 0.82
PBX1-201ENST00000340699 RBM24Q9BX46 236 aaKnown RBP20.2■□□□□ 0.82
PBX1-201ENST00000340699 EXOSC3Q9NQT5 275 aaKnown RBP20.2■□□□□ 0.82
PBX1-201ENST00000340699 A0A1W2PP18 115 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 EFNA2O43921 213 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 TNFSF13O75888 250 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 NTN1O95631 604 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 PLGP00747 810 aaPredicted RBP20.19■□□□□ 0.82
PBX1-201ENST00000340699 TFPTP0C1Z6 253 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 KIR2DL3P43628 341 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 SESN3P58005 492 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 PAGE3Q5JUK9 113 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 GTF2IRD2BQ6EKJ0 949 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 GTF2IRD2Q86UP8 949 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 SLC38A5Q8WUX1 472 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 TMEM120AQ9BXJ8 343 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 SLC52A3Q9NQ40 469 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 ACER3Q9NUN7 267 aa20.19■□□□□ 0.82
PBX1-201ENST00000340699 A0A0G2JPF8 293 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms