RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ZNF232Q9UNY5 417 aa10□□□□□ -0.81
RTN3-201ENST00000338850 ZNF443Q9Y2A4 671 aaPredicted RBP10□□□□□ -0.81
RTN3-201ENST00000338850 ARID1BQ8NFD5 2236 aaPredicted RBP10□□□□□ -0.81
RTN3-201ENST00000338850 IGSF10Q6WRI0 2623 aa10□□□□□ -0.81
RTN3-201ENST00000338850 NBEAQ8NFP9 2946 aa10□□□□□ -0.81
RTN3-201ENST00000338850 TRAPPC13A5PLN9 417 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 GABRPO00591 440 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 SSX4O60224 188 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 TMCC2O75069 709 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 RGS9O75916 674 aaPredicted RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 PCDH8O95206 1070 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 DBIP07108 87 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 PRKAR1AP10644 381 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ALPPL2P10696 532 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 HNRNPA2B1P22626 353 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 F8A1P23610 371 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ERP29P30040 261 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 AKT2P31751 481 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 MC3RP41968 323 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 CTBP2P56545 445 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 CLDN2P57739 230 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 EEF1A1P68104 462 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 CHRNEQ04844 493 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 KIR2DS3Q14952 304 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 TAB1Q15750 504 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 MANEAQ5SRI9 462 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 HBMQ6B0K9 141 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 TYW3Q6IPR3 259 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 ZNF322Q6U7Q0 402 aaPredicted RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 TMEM107Q6UX40 140 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 TMPRSS11FQ6ZWK6 438 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 GDF7Q7Z4P5 450 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ABI3BPQ7Z7G0 1075 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ASPGQ86U10 573 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 SLC25A45Q8N413 288 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 LNX2Q8N448 690 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ASCC1Q8N9N2 400 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 LILRB4Q8NHJ6 448 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ENKURQ8TC29 256 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ADAMTS15Q8TE58 950 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 OIT3Q8WWZ8 545 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 SLC9A6Q92581 669 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 TRIM63Q969Q1 353 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 C1GALT1C1Q96EU7 318 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 SLC41A3Q96GZ6 507 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 AHCYL2Q96HN2 611 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 HS6ST2Q96MM7 605 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 CMTM3Q96MX0 182 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 MCHR1Q99705 422 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 ATF6BQ99941 703 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 TTYH2Q9BSA4 534 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 MARVELD1Q9BSK0 173 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 TMEM43Q9BTV4 400 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 C11orf54Q9H0W9 315 aaPredicted RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 TP63Q9H3D4 680 aaPredicted RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 PIGUQ9H490 435 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 KLHL31Q9H511 634 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 EGLN3Q9H6Z9 239 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 FOLH1BQ9HBA9 442 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 MBNL1Q9NR56 388 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 ZNF275Q9NSD4 429 aaPredicted RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 MRPL39Q9NYK5 338 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 PTTG3PQ9NZH4 202 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 APOBEC3BQ9UH17 382 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 C19orf53Q9UNZ5 99 aaPredicted RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 CLCA2Q9UQC9 943 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 PRKAB1Q9Y478 270 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 URB1O60287 2271 aaKnown RBP9.99□□□□□ -0.81
RTN3-201ENST00000338850 WDFY3Q8IZQ1 3526 aa9.99□□□□□ -0.81
RTN3-201ENST00000338850 SLC22A31A6NKX4 558 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 WWP2O00308 870 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 CASKO14936 926 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 PGRMC2O15173 223 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 PLA2G10O15496 165 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 SIGLEC6O43699 453 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 PLOD3O60568 738 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 ERAL1O75616 437 aaKnown RBP9.98□□□□□ -0.81
RTN3-201ENST00000338850 RCBTB2O95199 551 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 GIMD1P0DJR0 217 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 ACP1P24666 158 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 CERS1P27544 350 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 RBMS1P29558 406 aaKnown RBP9.98□□□□□ -0.81
RTN3-201ENST00000338850 IGFALSP35858 605 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 MAP3K8P41279 467 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 ZNF136P52737 540 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 ACTC1P68032 377 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 ACTA1P68133 377 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 DUSP2Q05923 314 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 POU4F2Q12837 409 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 FGL2Q14314 439 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 TBRG1Q3YBR2 411 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 ZMAT1Q5H9K5 638 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 FHL5Q5TD97 284 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 HES3Q5TGS1 186 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 OR2G6Q5TZ20 316 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 GARNL3Q5VVW2 1013 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 TRIQKQ629K1 86 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 VASNQ6EMK4 673 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 FAM180BQ6P0A1 224 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 NIPAL3Q6P499 406 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms