RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MEX3DQ86XN8 651 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TOR1AIP2Q8NFQ8 470 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 DUSP19Q8WTR2 217 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ASB15Q8WXK1 588 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 KLHDC3Q9BQ90 382 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 CHP2O43745 196 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 EIF4E2O60573 245 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ITPKBP27987 946 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 EPHA2P29317 976 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NPRL3Q12980 569 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ALG10BQ5I7T1 473 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 C1orf94Q6P1W5 598 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 KLHL17Q6TDP4 642 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 OPN5Q6U736 354 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 USP51Q70EK9 711 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NRMQ8IXM6 262 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 BRIX1Q8TDN6 353 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 THOC3Q96J01 351 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 IP6K3Q96PC2 410 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 DGCR6LQ9BY27 220 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GRIP2Q9C0E4 1043 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GALNT9Q9HCQ5 603 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 KLRF1Q9NZS2 232 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ICAM5Q9UMF0 924 aa13.48□□□□□ -0.25
CDK5RAP3-201ENST00000338399 FREM2Q5SZK8 3169 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TRABD2BA6NFA1 517 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MYF6P23409 242 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SRSF6Q13247 344 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 OR5M10Q6IEU7 315 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 H3F3CQ6NXT2 135 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MBOAT2Q6ZWT7 520 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ARMC10Q8N2F6 343 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TMEM156Q8N614 296 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF563Q8TA94 476 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PIGXQ8TBF5 258 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 RNF138Q8WVD3 245 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 TMEM239Q8WW34 195 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ZNF524Q96C55 264 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MUS81Q96NY9 551 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GPA33Q99795 319 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GABARAPL3Q9BY60 117 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 UCK2Q9BZX2 261 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 METTL7AQ9H8H3 244 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SELENONQ9NZV5 590 aa13.47□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SLC16A6O15403 523 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 NUDT14O95848 222 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 IFNGR2P38484 337 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 OMPP47874 163 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 SLC6A8P48029 635 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 P2RX1P51575 399 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 GAS1P54826 345 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 DCAF10Q5QP82 559 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 ATP1A1-AS1Q5TC04 95 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 WBP2NLQ6ICG8 309 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 KRT80Q6KB66 452 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 Q6ZPB1 254 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 MISPQ8IVT2 679 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 B4GALNT2Q8NHY0 566 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 PSMF1Q92530 271 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 C3orf49Q96BT1 292 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 FAM46AQ96IP4 442 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 REV1Q9UBZ9 1251 aa13.46□□□□□ -0.25
CDK5RAP3-201ENST00000338399 KPNA4O00629 521 aaPredicted RBP13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TP53I11O14683 189 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GNB5O14775 395 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 BCKDKO14874 412 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PTGDSP41222 190 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CASP3P42574 277 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RPP38P78345 283 aaKnown RBP13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 C17orf67Q0P5P2 114 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 FOXC1Q12948 553 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TOMM34Q15785 309 aaPredicted RBP13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 UGT2A3Q6UWM9 527 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ISLR2Q6UXK2 745 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PARP8Q8N3A8 854 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 OR5W2Q8NH69 310 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PFN4Q8NHR9 129 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GNPDA2Q8TDQ7 276 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MPP4Q96JB8 637 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 NR1H4Q96RI1 486 aaPredicted RBP13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ATP13A2Q9NQ11 1180 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CNIH4Q9P003 139 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 KLK13Q9UKR3 277 aa13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CHCHD2Q9Y6H1 151 aaPredicted RBP13.46□□□□□ -0.26
CDK5RAP3-201ENST00000338399 OSMP13725 252 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PGCP20142 388 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MST1P26927 711 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GPR4P46093 362 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TPD52P55327 224 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ALDH6A1Q02252 535 aaKnown RBP13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CBFBQ13951 182 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 COL28A1Q2UY09 1125 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ACER2Q5QJU3 275 aa13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ZNF468Q5VIY5 522 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-201ENST00000338399 LINC00114Q6XXX2 140 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms