RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 DPP4P27487 766 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 APLNRP35414 380 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 SOX3P41225 446 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 C17orf67Q0P5P2 114 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 TP53I3Q53FA7 332 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 RPS19BP1Q86WX3 136 aaKnown RBP13.99□□□□□ -0.17
C9orf47-201ENST00000334490 SLC35F2Q8IXU6 374 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 ZNF420Q8TAQ5 688 aaPredicted RBP13.99□□□□□ -0.17
C9orf47-201ENST00000334490 BAHD1Q8TBE0 780 aaPredicted RBP13.99□□□□□ -0.17
C9orf47-201ENST00000334490 FAM71F1Q96KD3 344 aaPredicted RBP13.99□□□□□ -0.17
C9orf47-201ENST00000334490 SMURF1Q9HCE7 757 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 LOXHD1Q8IVV2 1947 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 LRRN3E7EW58 273 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 KIAA0513O60268 411 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 UTS2O95399 124 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 MYF6P23409 242 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 FRMPD2BQ6IN97 320 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 OR5AK2Q8NH90 309 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 TMEM121BQ9BXQ6 578 aaPredicted RBP13.99□□□□□ -0.17
C9orf47-201ENST00000334490 AGPAT4Q9NRZ5 378 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 SERGEFQ9UGK8 458 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 WDR37Q9Y2I8 494 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 LMO7DNF2Z398 122 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 RAD1O60671 282 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 F13BP05160 661 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 TMEM225BP0DP42 221 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 ABHD12BQ7Z5M8 362 aaPredicted RBP13.99□□□□□ -0.17
C9orf47-201ENST00000334490 TAMM41Q96BW9 452 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 ISOC1Q96CN7 298 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 NEURL3Q96EH8 262 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 FN3KQ9H479 309 aa13.99□□□□□ -0.17
C9orf47-201ENST00000334490 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 TCRBV3S1A0A5B6 114 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 IDSB3KWA1 339 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 DENRO43583 198 aaKnown RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 PEX11BO96011 259 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 TMBIM6P55061 237 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 GFERP55789 205 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 ETFBKMTQ8IXQ9 262 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 ALG8Q9BVK2 526 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 ULBP2Q9BZM5 246 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 MMP27Q9H306 513 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 SCN1AP35498 2009 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 FAM183AA6NL82 134 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 L7N2F9 121 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 MRPL33O75394 65 aaKnown RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 RGS9O75916 674 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 CISD3P0C7P0 127 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 SLC6A12P48065 614 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 VAMP2P63027 116 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 ELAVL1Q15717 326 aaKnown RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 HLA-BQ31612 363 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 ARSJQ5FYB0 599 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 MFSD12Q6NUT3 480 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 PRSS48Q7RTY5 328 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 KIAA0907Q7Z7F0 614 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 SPNS2Q8IVW8 549 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 INTS14Q96SY0 518 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 PAK1IP1Q9NWT1 392 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 SH2B3Q9UQQ2 575 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 DISC1C4P0D8 188 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 HMGB3O15347 200 aaKnown RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 WDPCPO95876 746 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 GABARAPL2P60520 117 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 VWA2Q5GFL6 755 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 TMEM69Q5SWH9 247 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 MISPQ8IVT2 679 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 ZNF442Q9H7R0 627 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 LOC105369274A0A096LPK9 316 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 LOC102723532A0A0G2JNH3 316 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 CXorf51AA0A1B0GTR3 108 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 RBBP9O75884 186 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 DDAH2O95865 285 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 CYB561P49447 251 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 FXYD6P3P58550 94 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 CDK5R2Q13319 367 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 C9orf135Q5VTT2 229 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 CWF19L1Q69YN2 538 aaKnown RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 GPR139Q6DWJ6 353 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 MRPL21Q7Z2W9 205 aaKnown RBP13.98□□□□□ -0.17
C9orf47-201ENST00000334490 MAVSQ7Z434 540 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 FOXRED2Q8IWF2 684 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 OR4N4Q8N0Y3 316 aa13.98□□□□□ -0.17
C9orf47-201ENST00000334490 IGHG1P01857 330 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 MYF5P13349 255 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 GCH1P30793 250 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 COX20Q5RI15 118 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 TMEM178AQ8NBL3 297 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 OR7G1Q8NGA0 311 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 STT3BQ8TCJ2 826 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 SLC17A4Q9Y2C5 497 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 SUSD5O60279 629 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 EXT1Q16394 746 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 GXYLT1Q4G148 440 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 PRSS36Q5K4E3 855 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 YOD1Q5VVQ6 348 aaPredicted RBP13.97□□□□□ -0.17
C9orf47-201ENST00000334490 DTX3Q8N9I9 347 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 ZNF597Q96LX8 424 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 FOXN4Q96NZ1 517 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 TUBA1CQ9BQE3 449 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms