RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 KIAA0141Q14154 515 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ZBTB37Q5TC79 503 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 WDR5BQ86VZ2 330 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 UMODL1-AS1Q8N2C9 162 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 TFAP2BQ92481 460 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SERINC2Q96SA4 455 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ROBO1Q9Y6N7 1651 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SLC16A6O15403 523 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 AQP8O94778 261 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CLIC3O95833 236 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 TNFSF8P32971 234 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ACVR1BP36896 505 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 BCL7AQ4VC05 210 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 AGBL4Q5VU57 503 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 DBX2Q6ZNG2 339 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 NRARPQ7Z6K4 114 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 GALNT10Q86SR1 603 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CFAP52Q8N1V2 620 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SLC5A8Q8N695 610 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SLC22A12Q96S37 553 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CLSTN3Q9BQT9 956 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 OR51I2Q9H344 312 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 UBQLN3Q9H347 655 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 PLEKHJ1Q9NW61 149 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 STEAP1Q9UHE8 339 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 MSRAQ9UJ68 235 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 HHLA2Q9UM44 414 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 FAM166BA8MTA8 275 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A6P0DMU7 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A5P0DMU8 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A7P0DMV0 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A8P0DMV1 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A9P0DMV2 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CNR2P34972 360 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 HIST1H3AP68431 136 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 PDE7AQ13946 482 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A2Q5DJT8 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A1Q5HYN5 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SLC35D3Q5M8T2 416 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 LCTLQ6UWM7 567 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 P4HA3Q7Z4N8 544 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 UEVLDQ8IX04 471 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 RGL4Q8IZJ4 473 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 RCBTB1Q8NDN9 531 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CT45A3Q8NHU0 189 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF689Q96CS4 500 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 BSCL2Q96G97 398 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SUSD3Q96L08 255 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 NSUN3Q9H649 340 aaKnown RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CLMPQ9H6B4 373 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 STYXL1Q9Y6J8 313 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 A0A1B0GUH1 482 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 GABARAPH6UMI1 98 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 NRP1O14786 923 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 MMP7P09237 267 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 IL1RNP18510 177 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CSKP41240 450 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ADCYAP1R1P41586 468 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SGSHP51688 502 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 TARBP2Q15633 366 aaKnown RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 MDGA2Q7Z553 956 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 NRMQ8IXM6 262 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 KRTCAP2Q8N6L1 136 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 OR4C5Q8NGB2 326 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 OR4E2Q8NGC2 313 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 INTS14Q96SY0 518 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 GPR174Q9BXC1 333 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 FZD8Q9H461 694 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 NECAP2Q9NVZ3 263 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 GJD2Q9UKL4 321 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 NME4O00746 187 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 DVL2O14641 736 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 OR2C1O95371 312 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 S1PR4O95977 384 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SERPINA5P05154 406 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 HTR2CP28335 458 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 DIO3P55073 304 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 HNF4GQ14541 408 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF239Q16600 458 aaKnown RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 LRIT3Q3SXY7 679 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ATPAF1Q5TC12 328 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CPNE4Q96A23 557 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 SLC30A3Q99726 388 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ACSS2Q9NR19 701 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM98Q9Y2Y6 226 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 COL1A1P02452 1464 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CIDEAO60543 219 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CNOT4O95628 575 aaKnown RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 EPHX1P07099 455 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 DRD5P21918 477 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CDKN1CP49918 316 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 PER3P56645 1201 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 RNF151Q2KHN1 245 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 CNKSR3Q6P9H4 555 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 LSMEM2Q8N112 164 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 FAM160A2Q8N612 972 aaPredicted RBP5.2□□□□□ -1.58
PTPRB-202ENST00000334414 OR52N1Q8NH53 320 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 OR51Q1Q8NH59 317 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 KCNA7Q96RP8 456 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 PAPOLGQ9BWT3 736 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms