RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 H7C1C5 153 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 UPK1BO75841 260 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 LCN1P31025 176 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 NR4A2P43354 598 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 LCN6P62502 163 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 IL20RBQ6UXL0 311 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 SLC16A11Q8NCK7 471 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
VSTM4-202ENST00000332853 L7N2F9 121 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 CD1EP15812 388 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 DRD5P21918 477 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 SLC2A5P22732 501 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 SLC6A8P48029 635 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 OR1D5P58170 312 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 RAB11BQ15907 218 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ARSGQ96EG1 525 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF419Q96HQ0 510 aaPredicted RBP12.13□□□□□ -0.47
VSTM4-202ENST00000332853 TRBV5-4A0A0C4DH59 114 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ACP2P11117 423 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 PRKXP51817 358 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 LIM2P55344 173 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 GALNT6Q8NCL4 622 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 FN3KQ9H479 309 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ASIC5Q9NY37 505 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 TRIP12Q14669 1992 aaPredicted RBP12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF16P17020 682 aaPredicted RBP12.13□□□□□ -0.47
VSTM4-202ENST00000332853 EPHA5P54756 1037 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 PUDPQ08623 228 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ACSM3Q53FZ2 586 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 XKRXQ6PP77 449 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 LRRN1Q6UXK5 716 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF683Q8IZ20 524 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ELP5Q8TE02 316 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 CD93Q9NPY3 652 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 UBQLN4Q9NRR5 601 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 CNOT2Q9NZN8 540 aaKnown RBP12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ICKQ9UPZ9 632 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 MRPS14O60783 128 aaKnown RBP12.13□□□□□ -0.47
VSTM4-202ENST00000332853 FOLR3P41439 243 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 GXYLT1Q4G148 440 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 GPR137CQ8N3F9 429 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 THAP6Q8TBB0 222 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ACOT12Q8WYK0 555 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 OR6C1Q96RD1 312 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 OR10A5Q9H207 317 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF337Q9Y3M9 751 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 DCDC2BA2VCK2 349 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 PRKYO43930 277 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 MAGEA2P43356 314 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF81P51508 661 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 DPTQ07507 201 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 TSPAN31Q12999 210 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 KCNAB1Q14722 419 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 THRSPQ92748 146 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 MS4A6EQ96DS6 147 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 ELP4Q96EB1 424 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
VSTM4-202ENST00000332853 MEIS3P1A6NDR6 274 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 POU3F4P49335 361 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 WBP2NLQ6ICG8 309 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 LSM14AQ8ND56 463 aaKnown RBP12.12□□□□□ -0.47
VSTM4-202ENST00000332853 TNFRSF13CQ96RJ3 184 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 C1QTNF3Q9BXJ4 246 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 SEMA6CQ9H3T2 930 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 KIR3DX1Q9H7L2 352 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 KLHL9Q9P2J3 617 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 AGAP5A6NIR3 686 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 EFCAB7A8K855 629 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
VSTM4-202ENST00000332853 TMPRSS11DO60235 418 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 SRPX2O60687 465 aaPredicted RBP12.12□□□□□ -0.47
VSTM4-202ENST00000332853 CD40LGP29965 261 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 DESI1Q6ICB0 168 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF595Q8IYB9 648 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF100Q8IYN0 542 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 BMFQ96LC9 184 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 KLHL15Q96M94 604 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 PLP2Q04941 152 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 FAM71F1Q96KD3 344 aaPredicted RBP12.12□□□□□ -0.47
VSTM4-202ENST00000332853 BCL7BQ9BQE9 202 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF350Q9GZX5 532 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 B4GALT7Q9UBV7 327 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 PHYHO14832 338 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 NUDT1P36639 197 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 TRMT12Q53H54 448 aaKnown RBP12.12□□□□□ -0.47
VSTM4-202ENST00000332853 AWAT2Q6E213 333 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF836Q6ZNA1 936 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 TIGD4Q8IY51 512 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 CTRCQ99895 268 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 RNF215Q9Y6U7 377 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 A0A1W2PR48 441 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 RAB2AP61019 212 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 TBCEQ15813 527 aaPredicted RBP12.12□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF565Q8N9K5 539 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 NTNG1Q9Y2I2 539 aa12.12□□□□□ -0.47
VSTM4-202ENST00000332853 KIF13BQ9NQT8 1826 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms