RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FRG2CA6NGY1 282 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 OR5F1O95221 314 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 ADAP00813 363 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 TNFRSF1BP20333 461 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 PRKACGP22612 351 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 EEF1A1P68104 462 aaKnown RBP15.06■□□□□ 0
PDLIM1-201ENST00000329399 MEP1AQ16819 746 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 EXOC3L2Q2M3D2 409 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 FLYWCH1Q4VC44 716 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 DEF8Q6ZN54 512 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 THAP5Q7Z6K1 395 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 TSPYL5Q86VY4 417 aaPredicted RBP15.06■□□□□ 0
PDLIM1-201ENST00000329399 SLC2A12Q8TD20 617 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 OTUB1Q96FW1 271 aaPredicted RBP15.06■□□□□ 0
PDLIM1-201ENST00000329399 BARD1Q99728 777 aaKnown RBP15.06■□□□□ 0
PDLIM1-201ENST00000329399 GABARAPL3Q9BY60 117 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 DEFB126Q9BYW3 111 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.06■□□□□ 0
PDLIM1-201ENST00000329399 PAPOLBQ9NRJ5 636 aaKnown RBP15.06■□□□□ 0
PDLIM1-201ENST00000329399 A4GNTQ9UNA3 340 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 OR10H1Q9Y4A9 318 aa15.06■□□□□ 0
PDLIM1-201ENST00000329399 MAGED1Q9Y5V3 778 aaPredicted RBP15.06■□□□□ 0
PDLIM1-201ENST00000329399 ASH1LQ9NR48 2969 aaKnown RBP15.05■□□□□ 0
PDLIM1-201ENST00000329399 OR5H15A6NDH6 313 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 TO15178 435 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 NEURL1O76050 574 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 CT45A8P0DMV1 189 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 CT45A9P0DMV2 189 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 ATP12AP54707 1039 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 RGS8P57771 180 aaPredicted RBP15.05■□□□□ -0
PDLIM1-201ENST00000329399 ESRRGP62508 458 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 SRSF1Q07955 248 aaKnown RBP eCLIP15.05■□□□□ -0
PDLIM1-201ENST00000329399 TOP3AQ13472 1001 aaPredicted RBP15.05■□□□□ -0
PDLIM1-201ENST00000329399 TRAM2Q15035 370 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 GPR68Q15743 365 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 KCTD21Q4G0X4 260 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 CT45A2Q5DJT8 189 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 TMEM154Q6P9G4 183 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 VRK2Q86Y07 508 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 ZNF440Q8IYI8 595 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 ARMC10Q8N2F6 343 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 ZNF527Q8NB42 609 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 MDS2Q8NDY4 140 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 SIMC1Q8NDZ2 872 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 OR6T1Q8NGN1 323 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 PIK3R3Q92569 461 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 SLC38A4Q969I6 547 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 HSPBAP1Q96EW2 488 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 RMND5BQ96G75 393 aaPredicted RBP15.05■□□□□ -0
PDLIM1-201ENST00000329399 LCORQ96JN0 433 aaPredicted RBP15.05■□□□□ -0
PDLIM1-201ENST00000329399 FEVQ99581 238 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 DGCR6LQ9BY27 220 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 GRIP2Q9C0E4 1043 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 RNF32Q9H0A6 362 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 KRCC1Q9NPI7 259 aaPredicted RBP15.05■□□□□ -0
PDLIM1-201ENST00000329399 TUBA8Q9NY65 449 aaPredicted RBP15.05■□□□□ -0
PDLIM1-201ENST00000329399 TESQ9UGI8 421 aaKnown RBP15.05■□□□□ -0
PDLIM1-201ENST00000329399 ZGRF1Q86YA3 2104 aa15.05■□□□□ -0
PDLIM1-201ENST00000329399 CDHR4A6H8M9 788 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 FFAR1O14842 300 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 CLPSP04118 112 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 UBTFL6P0CB48 400 aaPredicted RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 GNLYP22749 145 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 ADH7P40394 386 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 TPD52P55327 224 aaPredicted RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 CSNK2BP67870 215 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 NPRL3Q12980 569 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 MRPL49Q13405 166 aaKnown RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 RBM48Q5RL73 367 aaKnown RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 HLA-DQA1Q5Y7H0 255 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 TTC33Q6PID6 262 aaPredicted RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 CD300LDQ6UXZ3 194 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 SLC29A4Q7RTT9 530 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 HS3ST5Q8IZT8 346 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 SLC5A8Q8N695 610 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 OR8K3Q8NH51 312 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 VANGL1Q8TAA9 524 aaPredicted RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 GRHL3Q8TE85 626 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 TP53INP1Q96A56 240 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 VMP1Q96GC9 406 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 MBOAT4Q96T53 435 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 TEKT2Q9UIF3 430 aa15.04■□□□□ -0
PDLIM1-201ENST00000329399 SPTAN1Q13813 2472 aaKnown RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 USP9YO00507 2555 aaPredicted RBP15.04■□□□□ -0
PDLIM1-201ENST00000329399 J3KTA2 159 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 EPPINO95925 133 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 GSTM3P21266 225 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 CBLP22681 906 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 ELAVL4P26378 380 aaKnown RBP15.03■□□□□ -0
PDLIM1-201ENST00000329399 YAP1P46937 504 aaKnown RBP15.03■□□□□ -0
PDLIM1-201ENST00000329399 NUP107P57740 925 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 TAS2R41P59536 307 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 PMP22Q01453 160 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 OR1C1Q15619 314 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 ZIK1Q3SY52 487 aaPredicted RBP15.03■□□□□ -0
PDLIM1-201ENST00000329399 ZNF550Q7Z398 422 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 WDR53Q7Z5U6 358 aaPredicted RBP15.03■□□□□ -0
PDLIM1-201ENST00000329399 ZG16BQ96DA0 208 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 PITX2Q99697 317 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 ZNF559Q9BR84 538 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms