RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 LRRC25Q8N386 305 aaPredicted RBP17.7■□□□□ 0.42
RTN4-201ENST00000317610 MRPL43Q8N983 215 aaKnown RBP17.7■□□□□ 0.42
RTN4-201ENST00000317610 SPERTQ8NA61 448 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 RSPRY1Q96DX4 576 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 RADILQ96JH8 1075 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 SDF2Q99470 211 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 DLL4Q9NR61 685 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 KLHL1Q9NR64 748 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 CAMK2AQ9UQM7 478 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 SIGLEC7Q9Y286 467 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 SLC35A3Q9Y2D2 325 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 LRRN3E7EW58 273 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 J3QLW9 94 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 ASGR2P07307 311 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 ZNF19P17023 458 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 OR12D2P58182 307 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 ARHGEF6Q15052 776 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 OR1Q1Q15612 314 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 DUSP5Q16690 384 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 CLLU1Q5K131 121 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 PLPP4Q5VZY2 271 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 SLC22A10Q63ZE4 541 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 GRASPQ7Z6J2 395 aaPredicted RBP17.7■□□□□ 0.42
RTN4-201ENST00000317610 SFTPA1Q8IWL2 248 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 OR51Q1Q8NH59 317 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 MS4A3Q96HJ5 214 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 TIMM29Q9BSF4 260 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 ACTR6Q9GZN1 396 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 ZNF350Q9GZX5 532 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 LRRN3Q9H3W5 708 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 MBNL1Q9NR56 388 aaKnown RBP17.7■□□□□ 0.42
RTN4-201ENST00000317610 EMC3Q9P0I2 261 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 MRPL3P09001 348 aaKnown RBP17.69■□□□□ 0.42
RTN4-201ENST00000317610 NDUFS1P28331 727 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 ACVR1BP36896 505 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 CCR6P51684 374 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 RPS7P62081 194 aaKnown RBP17.69■□□□□ 0.42
RTN4-201ENST00000317610 ACTC1P68032 377 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 ACTA1P68133 377 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 RPTNQ6XPR3 784 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 OR5J2Q8NH18 312 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 OR56B4Q8NH76 319 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 GIMAP1Q8WWP7 306 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 SMPDL3BQ92485 455 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 GHSRQ92847 366 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 IFT27Q9BW83 186 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 DEC1Q9P2X7 70 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 SCP2D1Q9UJQ7 156 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 OR1A2Q9Y585 309 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 PRR19A6NJB7 356 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 ZNF593O00488 134 aaPredicted RBP17.69■□□□□ 0.42
RTN4-201ENST00000317610 FMO6PO60774 539 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 SYPP08247 313 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 EPXP11678 715 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 NOS3P29474 1203 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 BTN3A2P78410 334 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 DBPQ10586 325 aaPredicted RBP17.69■□□□□ 0.42
RTN4-201ENST00000317610 SNTA1Q13424 505 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 MAPK14Q16539 360 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 SEZ6L2Q6UXD5 910 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 LSRQ86X29 649 aaPredicted RBP17.69■□□□□ 0.42
RTN4-201ENST00000317610 OR13C2Q8NGS9 318 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 ARMC5Q96C12 935 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 OR51V1Q9H2C8 321 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 WDR26Q9H7D7 661 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 SPHK1Q9NYA1 384 aa17.69■□□□□ 0.42
RTN4-201ENST00000317610 ANKRD61A6NGH8 418 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 MPC2O95563 127 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 SERPINA3P01011 423 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 IFNA7P01567 189 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 ANKRD34CP0C6C1 535 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 SNRPBP14678 240 aaKnown RBP17.68■□□□□ 0.42
RTN4-201ENST00000317610 ENPP1P22413 925 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 DNASE1P24855 282 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 EXOSC6Q5RKV6 272 aaKnown RBP17.68■□□□□ 0.42
RTN4-201ENST00000317610 FAAH2Q6GMR7 532 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 GLRX5Q86SX6 157 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 ZNF619Q8N2I2 560 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 OR4D9Q8NGE8 314 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 OR13C5Q8NGS8 318 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 LRRC20Q8TCA0 184 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 NXPE2Q96DL1 559 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 CLIP3Q96DZ5 547 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 PRSS16Q9NQE7 514 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 KCNK6Q9Y257 313 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 SPEF1Q9Y4P9 236 aa17.68■□□□□ 0.42
RTN4-201ENST00000317610 TBC1D3EA0A087X179 549 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 TRABD2BA6NFA1 517 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 OGG1O15527 345 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 LATO43561 262 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 DBIP07108 87 aaKnown RBP17.67■□□□□ 0.42
RTN4-201ENST00000317610 EPHA4P54764 986 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 TNFRSF17Q02223 184 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 EXOSC2Q13868 293 aaKnown RBP17.67■□□□□ 0.42
RTN4-201ENST00000317610 SAMD14Q8IZD0 417 aaPredicted RBP17.67■□□□□ 0.42
RTN4-201ENST00000317610 RPLP0P6Q8NHW5 317 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 SMIM4Q8WVI0 70 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 GAL3ST3Q96A11 431 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 BPIFA2Q96DR5 249 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 ZFP3Q96NJ6 502 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms