RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 GALNT6Q8NCL4 622 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 DNAJA4Q8WW22 397 aaPredicted RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 TSLPQ969D9 159 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 COL26A1Q96A83 441 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 LGALS12Q96DT0 336 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 SNX18Q96RF0 628 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 SPSB2Q99619 263 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 NDC1Q9BTX1 674 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 SLIRPQ9GZT3 109 aaKnown RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 SH2D2AQ9NP31 389 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 CMC2Q9NRP2 79 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 C20orf141Q9NUB4 165 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 CEP290O15078 2479 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 D6RAR5 112 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 TUBA1BP68363 451 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 ERV3-1Q14264 604 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 GPR68Q15743 365 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 NEDD8Q15843 81 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 FIGNL1Q6PIW4 674 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 APOOLQ6UXV4 268 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 TUBA1AQ71U36 451 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 TMEM151BQ8IW70 566 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 NRMQ8IXM6 262 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 RORBQ92753 470 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 AHCYL2Q96HN2 611 aaKnown RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 HHATLQ9HCP6 504 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 SOHLH2Q9NX45 425 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 PDE4DIPQ5VU43 2346 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 ARPC3O15145 178 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 CSO75390 466 aaKnown RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 ASAH2BP0C7U1 165 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 SLC6A8P48029 635 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 CSTF1Q05048 431 aaKnown RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 TPBGQ13641 420 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 ZNF267Q14586 743 aaPredicted RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 MOGQ16653 247 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 KLHL22Q53GT1 634 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 KIRREL2Q6UWL6 708 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 ZNF730Q6ZMV8 503 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 TTLL10Q6ZVT0 673 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 OR4C3Q8NH37 302 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 IFI44Q8TCB0 444 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 UBQLN3Q9H347 655 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 INPP5EQ9NRR6 644 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 RASSF1Q9NS23 344 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 B4DXG7 233 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 TMX2-CTNND1H3BSU7 103 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 TERTO14746 1132 aaKnown RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 IDH3BO43837 385 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 CBFA2T3O75081 653 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 RAB36O95755 333 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 HMGN1P05114 100 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 RPLP0P05388 317 aaKnown RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 LCKP06239 509 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 POU2F1P14859 743 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 CD53P19397 219 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 DHPSP49366 369 aaPredicted RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 RGS6P49758 472 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 DUSP3P51452 185 aaPredicted RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 GPR50Q13585 617 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 CD226Q15762 336 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 ZNF239Q16600 458 aaKnown RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 SMARCD3Q6STE5 483 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 AHSA2Q719I0 299 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 FAM122BQ7Z309 247 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 MISPQ8IVT2 679 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 CACTIN-AS1Q8N1I8 211 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 SLC15A4Q8N697 577 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 PFN4Q8NHR9 129 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 ITPKCQ96DU7 683 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 MND1Q9BWT6 205 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 TSSK6Q9BXA6 273 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 PRRG3Q9BZD7 231 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 NXF5Q9H1B4 397 aaKnown RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 SELENONQ9NZV5 590 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 HIF3AQ9Y2N7 669 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 EXOSC1Q9Y3B2 195 aaKnown RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 CACNA1EQ15878 2313 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 UTS2O95399 124 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 PNMTP11086 282 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 IFNA8P32881 189 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 PTGDSP41222 190 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 CRYBB2P43320 205 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 ST13P50502 369 aaKnown RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 SUMO3P55854 103 aaPredicted RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 EGR4Q05215 589 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 COL9A2Q14055 689 aaPredicted RBP6.57□□□□□ -1.36
NPHP1-201ENST00000316534 VASNQ6EMK4 673 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 WBP2NLQ6ICG8 309 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 NIPAL3Q6P499 406 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 NHLRC1Q6VVB1 395 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 P2RY8Q86VZ1 359 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 P3H2Q8IVL5 708 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 OR2T33Q8NG76 320 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 OR52N1Q8NH53 320 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 TEX47Q8TBZ9 253 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 RNF217Q8TC41 542 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 ELP5Q8TE02 316 aa6.57□□□□□ -1.36
NPHP1-201ENST00000316534 DAZLQ92904 295 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms