RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MYL12BO14950 172 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 POLR1CO15160 346 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-201ENST00000315286 DYRK3O43781 588 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 BMP7P18075 431 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 CDH11P55287 796 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 ELAVL1Q15717 326 aaKnown RBP16.89■□□□□ 0.29
CCDC43-201ENST00000315286 LINC00114Q6XXX2 140 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 THSD4Q6ZMP0 1018 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 SHFQ7M4L6 423 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 CROCCP3Q8IVE0 287 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 BBS1Q8NFJ9 593 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 NUDT9Q9BW91 350 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 A0A1W2PQM1 296 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 J3QRK9 145 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 BHLHE40O14503 412 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 TOX3O15405 576 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-201ENST00000315286 SERPINB10P48595 397 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 RPS3AP61247 264 aaKnown RBP16.89■□□□□ 0.29
CCDC43-201ENST00000315286 TUBA1BP68363 451 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 CCL7P80098 99 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 C3orf38Q5JPI3 329 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 YOD1Q5VVQ6 348 aaPredicted RBP16.89■□□□□ 0.29
CCDC43-201ENST00000315286 ULK3Q6PHR2 472 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 TUBA1AQ71U36 451 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 OR52L1Q8NGH7 329 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 EDAQ92838 391 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 RFKQ969G6 155 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 ADIPOR1Q96A54 375 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 HINT3Q9NQE9 182 aaKnown RBP16.89■□□□□ 0.29
CCDC43-201ENST00000315286 MKL2Q9ULH7 1088 aa16.89■□□□□ 0.29
CCDC43-201ENST00000315286 ZDBF2Q9HCK1 2354 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 TRAV27A0A087WT01 109 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 FAM183AA6NL82 134 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 PTP4A3O75365 173 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 RCBTB2O95199 551 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 IL33O95760 270 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 RBM34P42696 430 aaKnown RBP16.88■□□□□ 0.29
CCDC43-201ENST00000315286 CSTF1Q05048 431 aaKnown RBP16.88■□□□□ 0.29
CCDC43-201ENST00000315286 SQSTM1Q13501 440 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 SLC35F1Q5T1Q4 408 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 SMARCD3Q6STE5 483 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 USP43Q70EL4 1123 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 CPOQ8IVL8 374 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 MAML2Q8IZL2 1156 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-201ENST00000315286 GATSQ8NAP1 163 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 OR51A7Q8NH64 312 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 DTNBP1Q96EV8 351 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 LCORQ96JN0 433 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-201ENST00000315286 VN1R1Q9GZP7 353 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 UBQLN4Q9NRR5 601 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 RPS6KB2Q9UBS0 482 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 CTSFQ9UBX1 484 aa16.88■□□□□ 0.29
CCDC43-201ENST00000315286 IRGMA1A4Y4 181 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 GNB5O14775 395 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 MYL12AP19105 171 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 FOXL2P58012 376 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 C1DQ13901 141 aaKnown RBP16.87■□□□□ 0.29
CCDC43-201ENST00000315286 NXNL2Q5VZ03 156 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 LNX2Q8N448 690 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 GAL3ST4Q96RP7 486 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 MKKSQ9NPJ1 570 aaPredicted RBP16.87■□□□□ 0.29
CCDC43-201ENST00000315286 SLC22A11Q9NSA0 550 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 CFL2Q9Y281 166 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 FRYLO94915 3013 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 SOCS6O14544 535 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 GPX5O75715 221 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 CFIP05156 583 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 CRYZQ08257 329 aaKnown RBP16.87■□□□□ 0.29
CCDC43-201ENST00000315286 CD226Q15762 336 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 TMEM44Q2T9K0 475 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 OR2G6Q5TZ20 316 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 FNDC7Q5VTL7 733 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 RPL13AP3Q6NVV1 102 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 APOOLQ6UXV4 268 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 LINC00299Q6ZSB3 139 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 OR4F15Q8NGB8 312 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 OTULINQ96BN8 352 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 TNFRSF13CQ96RJ3 184 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 IFT27Q9BW83 186 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 NRSN2Q9GZP1 204 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 RACGAP1Q9H0H5 632 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 GAREM1Q9H706 876 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 SLC35A3Q9Y2D2 325 aa16.87■□□□□ 0.29
CCDC43-201ENST00000315286 DMDP11532 3685 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 C2orf92A0A1B0GVN3 265 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 FRG2CA6NGY1 282 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 WWP2O00308 870 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 HCN1O60741 890 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 HTR1FP30939 366 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 MLLT11Q13015 90 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-201ENST00000315286 TIMM50Q3ZCQ8 353 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 DESI1Q6ICB0 168 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 PLBD1Q6P4A8 553 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 SHISA6Q6ZSJ9 500 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 COX15Q7KZN9 410 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 CXXC5Q7LFL8 322 aaKnown RBP16.86■□□□□ 0.29
CCDC43-201ENST00000315286 OAFQ86UD1 273 aa16.86■□□□□ 0.29
CCDC43-201ENST00000315286 PRR22Q8IZ63 422 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms