RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SENP5Q96HI0 755 aaPredicted RBP12.61□□□□□ -0.39
RFFL-201ENST00000315249 ATOH8Q96SQ7 321 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 TSPAN10Q9H1Z9 355 aaPredicted RBP12.61□□□□□ -0.39
RFFL-201ENST00000315249 PAK1IP1Q9NWT1 392 aaPredicted RBP12.61□□□□□ -0.39
RFFL-201ENST00000315249 ABRACLQ9P1F3 81 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 M0R129 80 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 IST1P53990 364 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 KCNJ10P78508 379 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 ZNF709Q8N972 641 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 ADAMTS16Q8TE57 1224 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 C16orf58Q96GQ5 468 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 DUSP13Q9UII6 198 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 ZNF221Q9UK13 617 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
RFFL-201ENST00000315249 TVP23AA6NH52 213 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 GABRG2P18507 467 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 SEMA3BQ13214 749 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 SLC35F2Q8IXU6 374 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 KLHL15Q96M94 604 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 AP1G1O43747 822 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 NPR2P20594 1047 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 OR51T1Q8NGJ9 327 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 CPT1CQ8TCG5 803 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 DECR2Q9NUI1 292 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 ZNF337Q9Y3M9 751 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 CSNK1G2P78368 415 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 BLMHQ13867 455 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 RPS19BP1Q86WX3 136 aaKnown RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 PIGQQ9BRB3 760 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 SYT11Q9BT88 431 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 PAPOLGQ9BWT3 736 aaKnown RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 YTHDF1Q9BYJ9 559 aaKnown RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 CRTAPO75718 401 aaPredicted RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 POLR2HP52434 150 aaKnown RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 MYBPHQ13203 477 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 BCL7AQ4VC05 210 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 CPOQ8IVL8 374 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 CNTN4Q8IWV2 1026 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 METTL4Q8N3J2 472 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 PDLIM5Q96HC4 596 aaKnown RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 DPAGT1Q9H3H5 408 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 TRGV8A0A0C4DH27 118 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 NRG2O14511 850 aaPredicted RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 SNNO75324 88 aaPredicted RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 RBM34P42696 430 aaKnown RBP12.6□□□□□ -0.39
RFFL-201ENST00000315249 HTR5AP47898 357 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 GARNL3Q5VVW2 1013 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 TRIM46Q7Z4K8 759 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 CCDC115Q96NT0 180 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 VAPAQ9P0L0 249 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 WNT16Q9UBV4 365 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 SLCO2B1O94956 709 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 ENPP1P22413 925 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 MAGEA12P43365 314 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 C3orf30Q96M34 536 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 ZNF350Q9GZX5 532 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 ENAMQ9NRM1 1142 aa12.6□□□□□ -0.39
RFFL-201ENST00000315249 NME4O00746 187 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 RGS9O75916 674 aaPredicted RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 SRSF5Q13243 272 aaKnown RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 MICAQ29983 383 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 ZNF791Q3KP31 576 aaPredicted RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 NT5C3BQ969T7 300 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 OR14J1Q9UGF5 321 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 LHCGRP22888 699 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 TCEAL3Q969E4 200 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SLC22A4Q9H015 551 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 POLE3Q9NRF9 147 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SDR39U1Q9NRG7 319 aaPredicted RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 ZNF224Q9NZL3 707 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SEC14L4Q9UDX3 406 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 PFDN2Q9UHV9 154 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 CASC3O15234 703 aaKnown RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 RASAL1O95294 804 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 PCBD1P61457 104 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 REEP5Q00765 189 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SLC45A3Q96JT2 553 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 ZNF700Q9H0M5 742 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 INTS6Q9UL03 887 aaKnown RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 NINQ8N4C6 2090 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 TRAV6A0A075B6T7 132 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 OR7A17O14581 309 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 LSM1O15116 133 aaKnown RBP12.59□□□□□ -0.39
RFFL-201ENST00000315249 RBBP9O75884 186 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 IGHV3-9P01782 118 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 CSF2P04141 144 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 OSMP13725 252 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 SLC5A12Q1EHB4 618 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 TMEM174Q8WUU8 243 aa12.59□□□□□ -0.39
RFFL-201ENST00000315249 ATAD5Q96QE3 1844 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms