RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZGLP1P0C6A0 271 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 MXD1Q05195 221 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 C14orf28Q4W4Y0 310 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TMEM201Q5SNT2 666 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 RASSF6Q6ZTQ3 369 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 ZNF367Q7RTV3 350 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CCDC190Q86UF4 302 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 C1orf216Q8TAB5 229 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TMEM163Q8TC26 289 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 SMAP2Q8WU79 429 aaPredicted RBP11.47□□□□□ -0.57
RNF4-201ENST00000314289 LRRN3Q9H3W5 708 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TIGARQ9NQ88 270 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 FLRT3Q9NZU0 649 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 MPDZO75970 2070 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CDC14CA4D256 554 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CLDN4O14493 209 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 SOCS6O14544 535 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CTNSO60931 367 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 PIAS2O75928 621 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 OR2B3O76000 313 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 MAP3K8P41279 467 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 GABRA4P48169 554 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 FXYD6P3P58550 94 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TEKQ02763 1124 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CDK10Q15131 360 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 ZNHIT3Q15649 155 aaPredicted RBP11.47□□□□□ -0.57
RNF4-201ENST00000314289 OCLNQ16625 522 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CCDC58Q4VC31 144 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 EIPR1Q53HC9 387 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 ZNF620Q6ZNG0 422 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 RAB43Q86YS6 212 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 GHDCQ8N2G8 530 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 SLC25A45Q8N413 288 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 LINC00471Q8N535 108 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 POGLUT1Q8NBL1 392 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TMEM239Q8WW34 195 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TSLPQ969D9 159 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 CRELD1Q96HD1 420 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 ST6GAL2Q96JF0 529 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 STACQ99469 402 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 TBX5Q99593 518 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 MUTYHQ9UIF7 546 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 PLCL2Q9UPR0 1127 aa11.47□□□□□ -0.57
RNF4-201ENST00000314289 NKX2-2O95096 273 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 THBS1P07996 1170 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 PRKCAP17252 672 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 FPR3P25089 353 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 MTNR1AP48039 350 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 ARL4DP49703 201 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 SLC16A1P53985 500 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 EFNB1P98172 346 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 GXYLT1Q4G148 440 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 CPOQ8IVL8 374 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 SLC35F3Q8IY50 421 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 PRR22Q8IZ63 422 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 VSTM2LQ96N03 204 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 SLC38A2Q96QD8 506 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 SNX18Q96RF0 628 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 NRSN2Q9GZP1 204 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 OR52D1Q9H346 318 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 SMURF1Q9HCE7 757 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 MEPEQ9NQ76 525 aaPredicted RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 CFL2Q9Y281 166 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 MRPS33Q9Y291 106 aaKnown RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 LSM2Q9Y333 95 aaKnown RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 TLCD2A6NGC4 264 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 C17orf51A8MQB3 221 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 TNFRSF10AO00220 468 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 BCAT2O15382 392 aaPredicted RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 NSA2O95478 260 aaKnown RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 FOSL2P15408 326 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 RPS4Y1P22090 263 aaKnown RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 ATP6V1E1P36543 226 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 CDH11P55287 796 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 STARD6P59095 220 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 VWA2Q5GFL6 755 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 PLBD1Q6P4A8 553 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 CADM4Q8NFZ8 388 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 OR7G1Q8NGA0 311 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 FGF11Q92914 225 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 ART5Q96L15 291 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 FYTTD1Q96QD9 318 aaKnown RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 HCAR1Q9BXC0 346 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 OR8D2Q9GZM6 311 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 OR10A5Q9H207 317 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 SIDT1Q9NXL6 827 aaKnown RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 SATB2Q9UPW6 733 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 SPIN1Q9Y657 262 aaPredicted RBP11.46□□□□□ -0.57
RNF4-201ENST00000314289 CLCA3PQ9Y6N3 262 aa11.46□□□□□ -0.57
RNF4-201ENST00000314289 EML5Q05BV3 1969 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 C17orf105B2RV13 164 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 SURF4O15260 269 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 SCO2O43819 266 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 NGFRP08138 427 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 CT45A8P0DMV1 189 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 CT45A9P0DMV2 189 aa11.46□□□□□ -0.58
RNF4-201ENST00000314289 PIPP12273 146 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms