RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 BCL6P41182 706 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 ZNF234Q14588 700 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 ZNF542PQ5EBM4 170 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 MRPL2Q5T653 305 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 ZNF547Q8IVP9 402 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 SFTPA1Q8IWL2 248 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 GOT1L1Q8NHS2 421 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 CAPNS2Q96L46 248 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 ACTRT3Q9BYD9 372 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 DPEP2Q9H4A9 486 aa13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 FARSAQ9Y285 508 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-202ENST00000314028 EDDM13A0A1B0GTR0 161 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 PRRT4C9JH25 899 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 H3BUI4 141 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 PEX12O00623 359 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 NARSO43776 548 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 PVRP15151 417 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 CDK3Q00526 305 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 PRDX1Q06830 199 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 MESP2Q0VG99 397 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 SQSTM1Q13501 440 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 EIPR1Q53HC9 387 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ELP2Q6IA86 826 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 C1orf94Q6P1W5 598 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 APOOLQ6UXV4 268 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 JAZF1Q86VZ6 243 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 NRROSQ86YC3 692 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 TTLQ8NG68 377 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 OR52E1Q8NGJ3 308 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ABHD1Q96SE0 405 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 LIPT1Q9Y234 373 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 IER3IP1Q9Y5U9 82 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ELOA3DA6NLF2 546 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 NRG2O14511 850 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 VEGFDO43915 354 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 TRAPPC2P0DI81 140 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 TRAPPC2BP0DI82 140 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 FGL2Q14314 439 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ELOA3BQ3SY89 546 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ZNF627Q7L945 461 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ELOA3Q8NG57 546 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 MOSPD2Q8NHP6 518 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ADAD1Q96M93 576 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 WDFY2Q96P53 400 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 TNFRSF13CQ96RJ3 184 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 SEMA4CQ9C0C4 833 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.34□□□□□ -0.275e-10■■■■■ 29
CSNK1D-202ENST00000314028 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 DICER1Q9UPY3 1922 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 TRAPPC13A5PLN9 417 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ZNF10P21506 573 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 RPS27P42677 84 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ERVFC1P60507 584 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 GMFBP60983 142 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 SHC2P98077 582 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 PDE7AQ13946 482 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 GRK1Q15835 563 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ALG10BQ5I7T1 473 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 GARNL3Q5VVW2 1013 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ZNF793Q6ZN11 406 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 RNF165Q6ZSG1 346 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 COMMD2Q86X83 199 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 OR5M3Q8NGP4 307 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 MRPL48Q96GC5 212 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 ACSS1Q9NUB1 689 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 KCMF1Q9P0J7 381 aa13.34□□□□□ -0.27
CSNK1D-202ENST00000314028 CASC3O15234 703 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 NFATC1O95644 943 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 CEBPBP17676 345 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 ATP5A1P25705 553 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 PSMD4P55036 377 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 AP3S2P59780 193 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 GALEQ14376 348 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 ZNF628Q5EBL2 1059 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 TMEM31Q5JXX7 168 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 C12orf40Q86WS4 652 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 GALNT6Q8NCL4 622 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 OR5K2Q8NHB8 316 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 ZNF563Q8TA94 476 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 S100A16Q96FQ6 103 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 MSLNLQ96KJ4 702 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 DERL3Q96Q80 235 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 SIRT3Q9NTG7 399 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 SPHK1Q9NYA1 384 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 AKAP7Q9P0M2 348 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 LSM2Q9Y333 95 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 RP1L1Q8IWN7 2480 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 LRIT2A6NDA9 550 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 CDC42EP2O14613 210 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 DOK2O60496 412 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 TEKQ02763 1124 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 EXOSC2Q13868 293 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 BEX5Q5H9J7 111 aa13.33□□□□□ -0.28
CSNK1D-202ENST00000314028 ZNF770Q6IQ21 691 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms