RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CPNE6O95741 557 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 CER1O95813 267 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 FURINP09958 794 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 IRF2P14316 349 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 RGS6P49758 472 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 RGS19P49795 217 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 CHRNEQ04844 493 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 RHEBQ15382 184 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 GPR139Q6DWJ6 353 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 PXKQ7Z7A4 578 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 SYT3Q9BQG1 590 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 MS4A8Q9BY19 250 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 EEF1E1-BLOC1S5C9J1V9 151 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 ACP2P11117 423 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 IFNGR1P15260 489 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 IRS1P35568 1242 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 PDE7AQ13946 482 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 MRPL2Q5T653 305 aaKnown RBP14.91□□□□□ -0.02
USP42-201ENST00000306177 VRK3Q8IV63 474 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 OR51T1Q8NGJ9 327 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 NOTOA8MTQ0 251 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 F5H5K5 113 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 FBXO45P0C2W1 286 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 MYOGP15173 224 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 GM2AP17900 193 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 TSPAN31Q12999 210 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 RAB11FIP2Q7L804 512 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 PIWIL3Q7Z3Z3 882 aaKnown RBP14.91□□□□□ -0.02
USP42-201ENST00000306177 OR51Q1Q8NH59 317 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 GGHQ92820 318 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 C4orf36Q96KX1 117 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 HYLS1Q96M11 299 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 CDC6Q99741 560 aa14.91□□□□□ -0.02
USP42-201ENST00000306177 MYO5AQ9Y4I1 1855 aaKnown RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 UBFD1O14562 309 aaKnown RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 RAD1O60671 282 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 CRTAPO75718 401 aaPredicted RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 CSNK1A1P48729 337 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 ERV3-1Q14264 604 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 SLC7A13Q8TCU3 470 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 SLC38A5Q8WUX1 472 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 CEPT1Q9Y6K0 416 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 NAP1L6A6NFF2 107 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 DRD5P21918 477 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 PSMB10P40306 273 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 GIPRP48546 466 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 FGL2Q14314 439 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 TMEM244Q5VVB8 128 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 MAVSQ7Z434 540 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 RNF113BQ8IZP6 322 aaKnown RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 ARL14Q8N4G2 192 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 BOLLQ8N9W6 283 aaKnown RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 CSNK2A3Q8NEV1 391 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 OR14A16Q8NHC5 309 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 ASB12Q8WXK4 309 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 TMEM30AQ9NV96 361 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 TEX10Q9NXF1 929 aaPredicted RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 TVP23AA6NH52 213 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 GYPBP06028 91 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 C21orf33P30042 268 aaPredicted RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 RPL34P49207 117 aaKnown RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 MLLT11Q13015 90 aaPredicted RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 ZNF322Q6U7Q0 402 aaPredicted RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 CHPT1Q8WUD6 406 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 TM9SF4Q92544 642 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 TCEAL3Q969E4 200 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 MCOLN1Q9GZU1 580 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 BABAM2Q9NXR7 383 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 EFCAB7A8K855 629 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 BOLA2-SMG1P6H3BVE0 249 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 MRPS10P82664 201 aaKnown RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 GPR50Q13585 617 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 ANKRD54Q6NXT1 300 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 BORAQ6PGQ7 559 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 ZNF784Q8NCA9 323 aaPredicted RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 MCTS1Q9ULC4 181 aaKnown RBP14.9□□□□□ -0.02
USP42-201ENST00000306177 SCN9AQ15858 1988 aa14.9□□□□□ -0.02
USP42-201ENST00000306177 MPIG6BO95866 241 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 ADH6P28332 368 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 OR1D4P47884 311 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 OTUD1Q5VV17 481 aaPredicted RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 SPRED1Q7Z699 444 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 LSM14AQ8ND56 463 aaKnown RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 ZFP90Q8TF47 636 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 RADILQ96JH8 1075 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 SLC25A18Q9H1K4 315 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 SLC6A14Q9UN76 642 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 USP22Q9UPT9 525 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 TRBV4-1A0A0J9YWV2 114 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 FAM183AA6NL82 134 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 TAPBPO15533 448 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 SLC16A7O60669 478 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 IFNA2P01563 188 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 ELMOD2Q8IZ81 293 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 CHRDQ9H2X0 955 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 CXXC1Q9P0U4 656 aaPredicted RBP14.89□□□□□ -0.03
USP42-201ENST00000306177 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 CSF1P09603 554 aa14.89□□□□□ -0.03
USP42-201ENST00000306177 PGFP49763 221 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms