RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 IFNA6P05013 189 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 FCGR2AP12318 317 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 HOXB3P14651 431 aaPredicted RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ENTPD1P49961 510 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 MZT1Q08AG7 82 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 SLC22A18ASQ8N1D0 253 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 EXD3Q8N9H8 876 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 GOLM1Q8NBJ4 401 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 C16orf52Q8NHV5 167 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ACOT11Q8WXI4 607 aaPredicted RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 FCGR1BQ92637 280 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 VN1R1Q9GZP7 353 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 SPNS1Q9H2V7 528 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF768Q9H5H4 540 aaKnown RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 TMED7Q9Y3B3 224 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ARID2Q68CP9 1835 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 OR2W5A6NFC9 320 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ENO4A6NNW6 628 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 C21orf140B9A014 251 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 EIF4E2O60573 245 aaKnown RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 IGHG1P01857 330 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 RPS18P62269 152 aaKnown RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 RNF4P78317 190 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 SLC3A1Q07837 685 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 IHHQ14623 411 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 CCDC103Q8IW40 242 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 CMIPQ8IY22 773 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 OR8J1Q8NGP2 316 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 TOR3AQ9H497 397 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ANKRA2Q9H9E1 313 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 MYO10Q9HD67 2058 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 KHDRBS3O75525 346 aaKnown RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 RASAL1O95294 804 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 NUDT7P0C024 238 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 NUP62P37198 522 aaPredicted RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ACTC1P68032 377 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ACTA1P68133 377 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 DUSP5Q16690 384 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 RSBN1Q5VWQ0 802 aaPredicted RBP8.58□□□□□ -1.04
PTPRE-202ENST00000306042 GALNT16Q8N428 558 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 D2HGDHQ8N465 521 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 TEX29Q8N6K0 151 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ZFP90Q8TF47 636 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 THRSPQ92748 146 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 SAMD8Q96LT4 415 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF337Q9Y3M9 751 aa8.58□□□□□ -1.04
PTPRE-202ENST00000306042 RLFQ13129 1914 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 ZSWIM8A7E2V4 1837 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 ZNF879B4DU55 563 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 GAPDHSO14556 408 aaPredicted RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 PEX14O75381 377 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 RIDAP52758 137 aaKnown RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 UBE2IP63279 158 aaKnown RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 GLO1Q04760 184 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 POU4F2Q12837 409 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 RSPO4Q2I0M5 234 aaPredicted RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 SPNS2Q8IVW8 549 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 SLC25A43Q8WUT9 341 aaPredicted RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 STON2Q8WXE9 905 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 SPTSSAQ969W0 71 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 OR2A5Q96R48 311 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 TUBB1Q9H4B7 451 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 DYNLRB1Q9NP97 96 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 RYDENQ9NUL5 291 aaKnown RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 ASIC5Q9NY37 505 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 HTR3EA5X5Y0 456 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 RBMXL2O75526 392 aaKnown RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 TAS2R43P59537 309 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 ADAM8P78325 824 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 FGFBP1Q14512 234 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 MELKQ14680 651 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 OR1C1Q15619 314 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 SLC6A19Q695T7 634 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 SLC25A45Q8N413 288 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 OR8S1Q8NH09 359 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 CSF3RQ99062 836 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 FAM60AQ9NP50 221 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 PLEK2Q9NYT0 353 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 PLA2G3Q9NZ20 509 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 NDRG3Q9UGV2 375 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 IER3IP1Q9Y5U9 82 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 AGFG2O95081 481 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 EML2O95834 649 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 GRPRP30550 384 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 RFC3P40938 356 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 MYBPHQ13203 477 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 ATP1A4Q13733 1029 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 QPRTQ15274 297 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 SLC18B1Q6NT16 456 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 TIGD4Q8IY51 512 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 DND1Q8IYX4 353 aaKnown RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 BOLLQ8N9W6 283 aaKnown RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 DCAF13Q9NV06 445 aaKnown RBP8.57□□□□□ -1.04
PTPRE-202ENST00000306042 TCFL5Q9UL49 500 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 PCDHGB2Q9Y5G2 931 aa8.57□□□□□ -1.04
PTPRE-202ENST00000306042 PLSCR5A0PG75 271 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 TRABD2BA6NFA1 517 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 ARL6IP5O75915 188 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 LCATP04180 440 aa8.56□□□□□ -1.04
PTPRE-202ENST00000306042 C8BP07358 591 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms