RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 FRG2Q64ET8 278 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 ADNP2Q6IQ32 1131 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 MED27Q6P2C8 311 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 FRG2BQ96QU4 278 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 RAB11FIP5Q9BXF6 653 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 RDH14Q9HBH5 336 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 TRPC4Q9UBN4 977 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 ACSL6Q9UKU0 697 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 PPT2Q9UMR5 302 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 HS3ST3A1Q9Y663 406 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 CACNA1HO95180 2353 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 A0A1W2PPC4 97 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 D6RAR5 112 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 TXNL1O43396 289 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 C1orf105O95561 183 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 ADAP00813 363 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 CEACAM5P06731 702 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 LPLP06858 475 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 CD27P26842 260 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 CCR5P51681 352 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 PGDP52209 483 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 TNFRSF17Q02223 184 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 OC90Q02509 493 aaPredicted RBP10.17□□□□□ -0.78
LSM3-201ENST00000306024 KIAA0040Q15053 153 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 ELOCQ15369 112 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 NDUFAF6Q330K2 333 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 FAM83HQ6ZRV2 1179 aaPredicted RBP10.17□□□□□ -0.78
LSM3-201ENST00000306024 PARGQ86W56 976 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 KLBQ86Z14 1044 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 SIAH3Q8IW03 269 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 GPR135Q8IZ08 494 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 TMEM185AQ8NFB2 350 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 KAT2AQ92830 837 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 C10orf90Q96M02 699 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 C1QTNF3Q9BXJ4 246 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 QRSL1Q9H0R6 528 aaKnown RBP10.17□□□□□ -0.78
LSM3-201ENST00000306024 DLL4Q9NR61 685 aa10.17□□□□□ -0.78
LSM3-201ENST00000306024 RUVBL1Q9Y265 456 aaKnown RBP10.17□□□□□ -0.78
LSM3-201ENST00000306024 EXOSC1Q9Y3B2 195 aaKnown RBP10.17□□□□□ -0.78
LSM3-201ENST00000306024 HELZP42694 1942 aaKnown RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 GABRR3A8MPY1 467 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 PIP5K1CO60331 668 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 PIPP12273 146 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 GPX2P18283 190 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 ETV5P41161 510 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 CDH11P55287 796 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 STARD6P59095 220 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 RAB5BP61020 215 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 TIAL1Q01085 375 aaKnown RBP eCLIP10.16□□□□□ -0.78
LSM3-201ENST00000306024 MEF2AQ02078 507 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 PUM1Q14671 1186 aaKnown RBP eCLIP10.16□□□□□ -0.784e-13■■□□□ 14.1
LSM3-201ENST00000306024 LRRC28Q86X40 367 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 PTOV1Q86YD1 416 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 SAMD14Q8IZD0 417 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 THAP6Q8TBB0 222 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 C7orf34Q96L11 122 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 PCBD2Q9H0N5 130 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 C2orf42Q9NWW7 574 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 AHSPQ9NZD4 102 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 ERVK-19Q9WJR5 959 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 RASD1Q9Y272 281 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 RHPN2P1A8MT19 583 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 SIGLEC6O43699 453 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 OR1F1O43749 312 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 TYRP1P17643 537 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 SLC6A1P30531 599 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 GABRA5P31644 462 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 FABP5Q01469 135 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 STX4Q12846 297 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 HES5Q5TA89 166 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 LYSMD4Q5XG99 296 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 RAB12Q6IQ22 244 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 GKN2Q86XP6 184 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 OR56B4Q8NH76 319 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 KLHL15Q96M94 604 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 TAPBPLQ9BX59 468 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 MVB12BQ9H7P6 319 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 TREM1Q9NP99 234 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 AKAP7Q9P0M2 348 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 VPS29Q9UBQ0 182 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 SEC14L3Q9UDX4 400 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 OR10H1Q9Y4A9 318 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 NUP210Q8TEM1 1887 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 COL4A4P53420 1690 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 IGHV1OR15-9A0A0B4J2B8 117 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 ANXA2P2A6NMY6 339 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 GABRPO00591 440 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 ARPC1BO15143 372 aaKnown RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 BCAT2O15382 392 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 CREBL2O60519 120 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 CMPK1P30085 196 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 S100A11P31949 105 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 PCGF2P35227 344 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 ASMTP46597 345 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 MTNR1AP48039 350 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 HNRNPKP61978 463 aaKnown RBP eCLIP10.16□□□□□ -0.78
LSM3-201ENST00000306024 TNFAIP8L2Q6P589 184 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms