RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SOHLH2Q9NX45 425 aa12.61□□□□□ -0.39
CDH8-201ENST00000299345 CLEC1BQ9P126 229 aa12.61□□□□□ -0.39
CDH8-201ENST00000299345 POLHQ9Y253 713 aa12.61□□□□□ -0.39
CDH8-201ENST00000299345 HTR3EA5X5Y0 456 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 GTPBP1O00178 669 aaKnown RBP12.6□□□□□ -0.39
CDH8-201ENST00000299345 CYR61O00622 381 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 BRINP1O60477 761 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 SOX30O94993 753 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 GYPBP06028 91 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 HTR3AP46098 478 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 PPP1CAP62136 330 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 TBRG1Q3YBR2 411 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 ZNF613Q6PF04 617 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 FGF11Q92914 225 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 TOE1Q96GM8 510 aaKnown RBP12.6□□□□□ -0.39
CDH8-201ENST00000299345 DGAT2Q96PD7 388 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 MKKSQ9NPJ1 570 aaPredicted RBP12.6□□□□□ -0.39
CDH8-201ENST00000299345 EVA1BQ9NVM1 165 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 CHD9Q3L8U1 2897 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 KLF4O43474 513 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 RNF13O43567 381 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 ST6GAL1P15907 406 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 CCR4P51679 360 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 DBPQ10586 325 aaPredicted RBP12.6□□□□□ -0.39
CDH8-201ENST00000299345 CRMP1Q14194 572 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 MCATQ8IVS2 390 aaKnown RBP12.6□□□□□ -0.39
CDH8-201ENST00000299345 GPALPP1Q8IXQ4 340 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 LNX2Q8N448 690 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 OR5W2Q8NH69 310 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 ZDHHC1Q8WTX9 485 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 TNFRSF13CQ96RJ3 184 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 TTTY10Q9BZA0 68 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 OR5K3A6NET4 321 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 SLC9B1P1A6NJY1 282 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 FMO6PO60774 539 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 IGHA1P01876 353 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 PYCR1P32322 319 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 ACVR1BP36896 505 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 MAP2K3P46734 347 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 ASAH1Q13510 395 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 WDR88Q6ZMY6 472 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 GHDCQ8N2G8 530 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 SLC44A3Q8N4M1 653 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 NLGN4YQ8NFZ3 816 aaPredicted RBP12.6□□□□□ -0.39
CDH8-201ENST00000299345 DEPDC7Q96QD5 511 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 TEAD3Q99594 435 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 PRTFDC1Q9NRG1 225 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 CMC2Q9NRP2 79 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 KCNE5Q9UJ90 142 aa12.6□□□□□ -0.39
CDH8-201ENST00000299345 ARHGEF17Q96PE2 2063 aaPredicted RBP12.6□□□□□ -0.39
CDH8-201ENST00000299345 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 ZGLP1P0C6A0 271 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 CFL1P23528 166 aaKnown RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 THSD4Q6ZMP0 1018 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 ZNF550Q7Z398 422 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 CEACAM19Q7Z692 300 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 AVL9Q8NBF6 648 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 GPBAR1Q8TDU6 330 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 KIAA1143Q96AT1 154 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 ZNF486Q96H40 463 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 ENKD1Q9H0I2 346 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 TRPV5Q9NQA5 729 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 ERV3-1Q14264 604 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 GLYR1Q49A26 553 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 FHL5Q5TD97 284 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 GARNL3Q5VVW2 1013 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 OR52E2Q8NGJ4 325 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 PMM1Q92871 262 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 POLE3Q9NRF9 147 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 NPAP1Q9NZP6 1156 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 BAIAP2Q9UQB8 552 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 KIF26AQ9ULI4 1882 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 CHP2O43745 196 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 TAS2R43P59537 309 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 LGALS3BPQ08380 585 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 ARHGAP11AQ6P4F7 1023 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 TMPRSS11FQ6ZWK6 438 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 ZAR1Q86SH2 424 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 SHISA5Q8N114 240 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 METTL27Q8N6F8 245 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 OR4K13Q8NH42 304 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 DNAJA4Q8WW22 397 aaPredicted RBP12.59□□□□□ -0.39
CDH8-201ENST00000299345 SEMA6CQ9H3T2 930 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 FOLH1BQ9HBA9 442 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 MMP17Q9ULZ9 603 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 SIGLEC7Q9Y286 467 aa12.59□□□□□ -0.39
CDH8-201ENST00000299345 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.39
CDH8-201ENST00000299345 SLC19A2O60779 497 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 CSTAP01040 98 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 RFX2P48378 723 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 GPR50Q13585 617 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 CD200R1LQ6Q8B3 271 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 RNF44Q7L0R7 432 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 OR51L1Q8NGJ5 315 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 SNX33Q8WV41 574 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 SMPDL3BQ92485 455 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 C4orf36Q96KX1 117 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms