RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GPR55Q9Y2T6 319 aaPredicted RBP19.2■□□□□ 0.66
SMCO4-201ENST00000298966 KLF13Q9Y2Y9 288 aaPredicted RBP19.2■□□□□ 0.66
SMCO4-201ENST00000298966 CLPSP04118 112 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 DRD5P21918 477 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 PRKAR1BP31321 381 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 KCNJ5P48544 419 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 PSMD4P55036 377 aaKnown RBP19.19■□□□□ 0.66
SMCO4-201ENST00000298966 WLSQ5T9L3 541 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 HLA-DQA1Q5Y7H0 255 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 CCDC71Q8IV32 467 aaPredicted RBP19.19■□□□□ 0.66
SMCO4-201ENST00000298966 ZDHHC21Q8IVQ6 265 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 PEX5LQ8IYB4 626 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 B3GNT7Q8NFL0 401 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 OR8K3Q8NH51 312 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 SEMA6AQ9H2E6 1030 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 GSX1Q9H4S2 264 aaPredicted RBP19.19■□□□□ 0.66
SMCO4-201ENST00000298966 ARMC7Q9H6L4 198 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 HRH3Q9Y5N1 445 aa19.19■□□□□ 0.66
SMCO4-201ENST00000298966 FRG2CA6NGY1 282 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 TMEM229AB2RXF0 380 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 KLRC4-KLRK1H3BQV0 150 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 ACOX3O15254 700 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 HS6ST1O60243 411 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 DBIP07108 87 aaKnown RBP19.18■□□□□ 0.66
SMCO4-201ENST00000298966 CD247P20963 164 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 ATP6V1C1P21283 382 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 HLCSP50747 726 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 KCNJ10P78508 379 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 FOXD4Q12950 439 aaPredicted RBP19.18■□□□□ 0.66
SMCO4-201ENST00000298966 LARS2Q15031 903 aaKnown RBP19.18■□□□□ 0.66
SMCO4-201ENST00000298966 LRRC36Q1X8D7 754 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 RPS26P11Q5JNZ5 115 aaPredicted RBP19.18■□□□□ 0.66
SMCO4-201ENST00000298966 DHRS4L2Q6PKH6 230 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 FRRS1Q6ZNA5 592 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 GALNT10Q86SR1 603 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 SIMC1Q8NDZ2 872 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 ELP5Q8TE02 316 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 VMP1Q96GC9 406 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 C9orf16Q9BUW7 83 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 OSBPL10Q9BXB5 764 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 KLHL28Q9NXS3 571 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 SLC9A8Q9Y2E8 581 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 KCNE3Q9Y6H6 103 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 ZNF407Q9C0G0 2248 aa19.18■□□□□ 0.66
SMCO4-201ENST00000298966 NINQ8N4C6 2090 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 A8MUA0 341 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 HRKO00198 91 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 TO15178 435 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 KIAA0513O60268 411 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 CST1P01037 141 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 MT-ND1P03886 318 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 PABPC4LP0CB38 370 aaKnown RBP19.17■□□□□ 0.66
SMCO4-201ENST00000298966 CT45A8P0DMV1 189 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 CT45A9P0DMV2 189 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 FOSL1P15407 271 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 ACADSP16219 412 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 PIGAP37287 484 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 RFC3P40938 356 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 HSPA13P48723 471 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 CHRNEQ04844 493 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 TAF11Q15544 211 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMCO4-201ENST00000298966 EIPR1Q53HC9 387 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 CT45A2Q5DJT8 189 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 TYW3Q6IPR3 259 aaKnown RBP19.17■□□□□ 0.66
SMCO4-201ENST00000298966 ARHGAP11AQ6P4F7 1023 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 ZNF227Q86WZ6 799 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 TP53INP1Q96A56 240 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 HSPBAP1Q96EW2 488 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 LCORQ96JN0 433 aaPredicted RBP19.17■□□□□ 0.66
SMCO4-201ENST00000298966 ITPAQ9BY32 194 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 ST6GALNAC2Q9UJ37 374 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 SLC13A4Q9UKG4 626 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 EDARQ9UNE0 448 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 OR10H1Q9Y4A9 318 aa19.17■□□□□ 0.66
SMCO4-201ENST00000298966 C2orf92A0A1B0GVN3 265 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 KCNK2O95069 426 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 OPN1SWP03999 348 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 IFNW1P05000 195 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 FESP07332 822 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 ZNF26P17031 533 aaPredicted RBP19.16■□□□□ 0.66
SMCO4-201ENST00000298966 RPS4Y1P22090 263 aaKnown RBP19.16■□□□□ 0.66
SMCO4-201ENST00000298966 GPR143P51810 404 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 NUP107P57740 925 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 MLF1P58340 268 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 PMPCAQ10713 525 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 EBPQ15125 230 aaKnown RBP19.16■□□□□ 0.66
SMCO4-201ENST00000298966 DECR1Q16698 335 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 PPP4R4Q6NUP7 873 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 VTCN1Q7Z7D3 282 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 SULF2Q8IWU5 870 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 SVOPLQ8N434 492 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 RPRMLQ8N4K4 120 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 ICA1LQ8NDH6 482 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 NFAM1Q8NET5 270 aaPredicted RBP19.16■□□□□ 0.66
SMCO4-201ENST00000298966 NUBPLQ8TB37 319 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 OTUB1Q96FW1 271 aaPredicted RBP19.16■□□□□ 0.66
SMCO4-201ENST00000298966 C7orf34Q96L11 122 aa19.16■□□□□ 0.66
SMCO4-201ENST00000298966 POLDIP3Q9BY77 421 aaKnown RBP19.16■□□□□ 0.66
SMCO4-201ENST00000298966 HOXD1Q9GZZ0 328 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms