RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CWH43Q9H720 699 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 ZNF208O43345 1280 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 NR2C1P13056 603 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 PSMB5P28074 263 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 HOXA9P31269 272 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 CLDN12P56749 244 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 GRK1Q15835 563 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 C3orf38Q5JPI3 329 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 CDKL4Q5MAI5 379 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 MCATQ8IVS2 390 aaKnown RBP12.58□□□□□ -0.4
HPS3-201ENST00000296051 MMP21Q8N119 569 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 OR8J2Q8NGG1 315 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 MSLNLQ96KJ4 702 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 SLC6A18Q96N87 628 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 ULBP3Q9BZM4 244 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 RABL2AQ9UBK7 228 aaPredicted RBP12.58□□□□□ -0.4
HPS3-201ENST00000296051 PCDHGB7Q9Y5F8 929 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 PCDHGB1Q9Y5G3 927 aa12.58□□□□□ -0.4
HPS3-201ENST00000296051 PRKYO43930 277 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 LIPCP11150 499 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 CTGFP29279 349 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 CRYZQ08257 329 aaKnown RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 FATE1Q969F0 183 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 PELOQ9BRX2 385 aaKnown RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 C14orf105Q9NVL8 296 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 KCMF1Q9P0J7 381 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 M0R082 166 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 CACNG3O60359 315 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 TSPAN12O95859 305 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 SNRPBP14678 240 aaKnown RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 RORAP35398 523 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 OR1D4P47884 311 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 RPL34P49207 117 aaKnown RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 SRP9P49458 86 aaKnown RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 CCR6P51684 374 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 FOXK1P85037 733 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 SEC23BQ15437 767 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 GID4Q8IVV7 300 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 ARL14Q8N4G2 192 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 NSMAFQ92636 917 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 ZC3H10Q96K80 434 aaKnown RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 IFT46Q9NQC8 304 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 GLTPQ9NZD2 209 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 A0A0X1KG70 313 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 UNC119BA6NIH7 251 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 ZNF705EA8MWA4 302 aaPredicted RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 SGK494L7N484 410 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 RRP8O43159 456 aaKnown RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 ARHGDIBP52566 201 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 SGCAQ16586 387 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 ACSM3Q53FZ2 586 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 MSRB3Q8IXL7 192 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 OR2L5Q8NG80 312 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 OR6N2Q8NGY6 317 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 WFDC5Q8TCV5 224 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 ARSGQ96EG1 525 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 G6PC3Q9BUM1 346 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 GSKIPQ9P0R6 139 aa12.57□□□□□ -0.4
HPS3-201ENST00000296051 RPH3AQ9Y2J0 694 aaPredicted RBP12.57□□□□□ -0.4
HPS3-201ENST00000296051 EFCAB7A8K855 629 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 MC3RP41968 323 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 CCNJQ5T5M9 372 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 CARD17Q5XLA6 110 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
HPS3-201ENST00000296051 OR4C11Q6IEV9 310 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PYHIN1Q6K0P9 492 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 LYPD4Q6UWN0 246 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 OR5W2Q8NH69 310 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 SNIP1Q8TAD8 396 aaKnown RBP12.56□□□□□ -0.4
HPS3-201ENST00000296051 ZNF304Q9HCX3 659 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PRSS23O95084 383 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PRH1P02810 166 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 ARAFP10398 606 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PGAM2P15259 253 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 DDOSTP39656 456 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 TPMTP51580 245 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 TAS2R38P59533 333 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PSPHP78330 225 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 FAM198BQ6UWH4 519 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 VRK2Q86Y07 508 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PDZD9Q8IXQ8 264 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 CBARPQ8N350 705 aaPredicted RBP12.56□□□□□ -0.4
HPS3-201ENST00000296051 THAP6Q8TBB0 222 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PSD2Q9BQI7 771 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 CXorf36Q9H7Y0 433 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 RCE1Q9Y256 329 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 A0A0G2JMP0 313 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 TMEM202A6NGA9 273 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 B4DXG7 233 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 SRFP11831 508 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 E2F1Q01094 437 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 BEX5Q5H9J7 111 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 PRR22Q8IZ63 422 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 OR4M2Q8NGB6 313 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 ACOT12Q8WYK0 555 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 ATXN7L1Q9ULK2 861 aaPredicted RBP12.56□□□□□ -0.4
HPS3-201ENST00000296051 TMEM5Q9Y2B1 443 aa12.56□□□□□ -0.4
HPS3-201ENST00000296051 UPK1AO00322 258 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms