RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 BAIAP2L2Q6UXY1 529 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 RPS19BP1Q86WX3 136 aaKnown RBP16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 C12orf43Q96C57 262 aaKnown RBP16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 TM4SF18Q96CE8 201 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 C12orf71A8MTZ7 269 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 SLC43A1O75387 559 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 PIP5KL1Q5T9C9 394 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 DPY19L2P1Q6NXN4 242 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 BEND4Q6ZU67 534 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 ICKQ9UPZ9 632 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 RP1L1Q8IWN7 2480 aaPredicted RBP16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 DOCK1Q14185 1865 aa16.53■□□□□ 0.24
CDC42EP3-201ENST00000295324 ANKRD30BLA7E2S9 258 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 PRKYO43930 277 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 ITGB8P26012 769 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 EIF1P41567 113 aaKnown RBP16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 POLR2HP52434 150 aaKnown RBP16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 DNTTIP1Q9H147 329 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 OR10A2Q9H208 303 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 MEPEQ9NQ76 525 aaPredicted RBP16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 ZNF69Q9UC07 566 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 ZNF791Q3KP31 576 aaPredicted RBP16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 SDR9C7Q8NEX9 313 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 SLC1A7O00341 560 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 VNN2O95498 520 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 ELAVL1Q15717 326 aaKnown RBP16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 RAB11BQ15907 218 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 FCRLBQ6BAA4 426 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 RCBTB1Q8NDN9 531 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 TRMT10AQ8TBZ6 339 aaKnown RBP16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 OR52D1Q9H346 318 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 CSNK1G3Q9Y6M4 447 aa16.52■□□□□ 0.24
CDC42EP3-201ENST00000295324 OR2AT4A6NND4 320 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 MSX1P28360 303 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 S100A2P29034 98 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 TMBIM6P55061 237 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 MS4A2Q01362 244 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 Q6ZS52 159 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 RAB9BQ9NP90 201 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 GPR83Q9NYM4 423 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 CD8B2A6NJW9 211 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 GABBR2O75899 941 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 MAS1P04201 325 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 ALDOCP09972 364 aaKnown RBP16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 CD8BP10966 210 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 GABRG2P18507 467 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 CFL1P23528 166 aaKnown RBP16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 OGFRL1Q5TC84 451 aaPredicted RBP16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 C22orf42Q6IC83 251 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 TECPR1Q7Z6L1 1165 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 THAP6Q8TBB0 222 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 PIGQQ9BRB3 760 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 DYNLRB1Q9NP97 96 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 STUB1Q9UNE7 303 aa16.52■□□□□ 0.23
CDC42EP3-201ENST00000295324 CLCA1A8K7I4 914 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 GNRHRP30968 328 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 DEFA5Q01523 94 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 AGBL4Q5VU57 503 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 TRAPPC6BQ86SZ2 158 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 SPAG16Q8N0X2 631 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 C17orf50Q8WW18 174 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 SENP5Q96HI0 755 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC16A7O60669 478 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 RPS5P46782 204 aaKnown RBP16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 FXYD6P3P58550 94 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 SLC35A1P78382 337 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 POTEKPQ9BYX7 375 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 ATG4BQ9Y4P1 393 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 MAGEA12P43365 314 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 TMEM236Q5W0B7 351 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 MED25Q71SY5 747 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 RNF113BQ8IZP6 322 aaKnown RBP16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 MARVELD2Q8N4S9 558 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 PATE1Q8WXA2 126 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 C16orf58Q96GQ5 468 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 FAM71F1Q96KD3 344 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 IER2Q9BTL4 223 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 SIPA1L3O60292 1781 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 TAPBPO15533 448 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 UTS2O95399 124 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 GTF2F2P13984 249 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 AMY2BP19961 511 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 PITPNBP48739 271 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 PROX2Q3B8N5 592 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 EIF5AL1Q6IS14 154 aaKnown RBP16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 FOXRED2Q8IWF2 684 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 AMDHD1Q96NU7 426 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 UCKL1Q9NWZ5 548 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 POLHQ9Y253 713 aa16.51■□□□□ 0.23
CDC42EP3-201ENST00000295324 PHC1P78364 1004 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 HTR4Q13639 388 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 KMT5CQ86Y97 462 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 C19orf43Q9BQ61 176 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 PIGBOS1A0A0B4J2F0 54 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 CAPZBP47756 277 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 PIGFQ07326 219 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 AAED1Q7RTV5 226 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 IGFN1Q86VF2 1251 aa16.5■□□□□ 0.23
CDC42EP3-201ENST00000295324 MFSD8Q8NHS3 518 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms