RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 BRIX1Q8TDN6 353 aaKnown RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 FGF11Q92914 225 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 ADIPOR1Q96A54 375 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 BPIFA2Q96DR5 249 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 RNFT2Q96EX2 444 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 SAMD8Q96LT4 415 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 FAM210AQ96ND0 272 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 SLC46A1Q96NT5 459 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 SLC26A1Q9H2B4 701 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 OR52D1Q9H346 318 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 ZBTB20Q9HC78 741 aaPredicted RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 HMG20AQ9NP66 347 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 MRPS18AQ9NVS2 196 aaKnown RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 ZNF223Q9UK11 482 aaPredicted RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 PPIEQ9UNP9 301 aaKnown RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 EXPH5Q8NEV8 1989 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 A0A1B0GWA3 101 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 KDM4EB2RXH2 506 aaPredicted RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 TIAF1O95411 115 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 CSTAP01040 98 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 HBQ1P09105 142 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 SAGP10523 405 aaPredicted RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 LCN1P31025 176 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 RBM34P42696 430 aaKnown RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 MLLT10P55197 1068 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 CDH11P55287 796 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 IL11RAQ14626 422 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 ALG10BQ5I7T1 473 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 C16orf87Q6PH81 154 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 HSDL2Q6YN16 418 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 TMPRSS11FQ6ZWK6 438 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 TMEM151BQ8IW70 566 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 AMER2Q8N7J2 671 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 LSMEM1Q8N8F7 131 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 SLC38A9Q8NBW4 561 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 S100ZQ8WXG8 99 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 TSLPQ969D9 159 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 CLIP3Q96DZ5 547 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 OR6C1Q96RD1 312 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 CHCHD6Q9BRQ6 235 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 VN1R1Q9GZP7 353 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 HOXD1Q9GZZ0 328 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 UBQLN3Q9H347 655 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 HHATLQ9HCP6 504 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 CLEC2DQ9UHP7 191 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 A0A1B0GVG6 124 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 CLDN25C9JDP6 229 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 TO15178 435 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 CSO75390 466 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 HPGDP15428 266 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ADH7P40394 386 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ACAA2P42765 397 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 PPICP45877 212 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 GPR143P51810 404 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 COPZ1P61923 177 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 C3orf38Q5JPI3 329 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ARHGAP40Q5TG30 622 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 PWWP2BQ6NUJ5 590 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ULK3Q6PHR2 472 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ZNF441Q8N8Z8 693 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ZNF527Q8NB42 609 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 OR14A16Q8NHC5 309 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 GFM1Q96RP9 751 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 OR8D2Q9GZM6 311 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 OR51E2Q9H255 320 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 PALMDQ9NP74 551 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ATP13A2Q9NQ11 1180 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 C20orf141Q9NUB4 165 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 IL20RAQ9UHF4 553 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 OSGIN1Q9UJX0 560 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 MRTO4Q9UKD2 239 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 RARRES3Q9UL19 164 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 SLC35A3Q9Y2D2 325 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 LSM2Q9Y333 95 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 FRG2CA6NGY1 282 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 SERINC4A6NH21 518 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 OR6C76A6NM76 312 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 EFCAB7A8K855 629 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 A8MUA0 341 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 MAKP20794 623 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 PSMA1P25786 263 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 OPRL1P41146 370 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 GRK6P43250 576 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 CTBP2P56545 445 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ZNF846Q147U1 533 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 FNDC7Q5VTL7 733 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 ZNF440Q8IYI8 595 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 CACTIN-AS1Q8N1I8 211 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 CADM2Q8N3J6 435 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 SLC15A4Q8N697 577 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 C17orf47Q8NEP4 570 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 SLC2A12Q8TD20 617 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 SH3YL1Q96HL8 342 aaPredicted RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 OPALINQ96PE5 141 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 SLC7A5P2Q9GIP4 190 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 WDR12Q9GZL7 423 aaKnown RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 ARRDC1-AS1Q9H2J1 176 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 OCEL1Q9H607 264 aa8.41□□□□□ -1.06
PDPN-201ENST00000294489 FGF20Q9NP95 211 aaPredicted RBP8.41□□□□□ -1.06
PDPN-201ENST00000294489 FLRT3Q9NZU0 649 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms