RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 PACSIN3Q9UKS6 424 aa13.72□□□□□ -0.21
PDE6D-201ENST00000287600 DTNAQ9Y4J8 743 aa13.72□□□□□ -0.21
PDE6D-201ENST00000287600 PRAMEF27A3QJZ7 478 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 GTPBP1O00178 669 aaKnown RBP13.71□□□□□ -0.21
PDE6D-201ENST00000287600 CASKO14936 926 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 GPR37O15354 613 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 CHMP24386 653 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 CRATP43155 626 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 LHX2P50458 406 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 ARFIP2P53365 341 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 B3GALT5-AS1P59052 145 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 TXNL4AP83876 142 aaKnown RBP13.71□□□□□ -0.21
PDE6D-201ENST00000287600 HPCAP84074 193 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 ZNF117Q03924 483 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 FUT5Q11128 374 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 PDZK1Q5T2W1 519 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 METTL21CQ5VZV1 264 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 TYW3Q6IPR3 259 aaKnown RBP13.71□□□□□ -0.21
PDE6D-201ENST00000287600 P4HA3Q7Z4N8 544 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 MTERF4Q7Z6M4 381 aaKnown RBP13.71□□□□□ -0.21
PDE6D-201ENST00000287600 ADGRE4PQ86SQ3 457 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 ANKFN1Q8N957 763 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 PAIP1Q9H074 479 aaKnown RBP13.71□□□□□ -0.21
PDE6D-201ENST00000287600 CCDC134Q9H6E4 229 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 SLC52A3Q9NQ40 469 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 KCNE5Q9UJ90 142 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 LIPT1Q9Y234 373 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 VDAC3Q9Y277 283 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 CARD8Q9Y2G2 431 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 WDR45Q9Y484 360 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 PCDHB14Q9Y5E9 798 aa13.71□□□□□ -0.21
PDE6D-201ENST00000287600 MED12LQ86YW9 2145 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 OR2M5A3KFT3 312 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 SERINC4A6NH21 518 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 SHISA8B8ZZ34 492 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 OIP5O43482 229 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 TNFRSF21O75509 655 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 UGT2B17O75795 530 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 H6PDO95479 791 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 GUSBP08236 651 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 ETFAP13804 333 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 ZNF708P17019 499 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 MVDP53602 400 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 CHRNEQ04844 493 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 ZNF141Q15928 474 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 SYPL1Q16563 259 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 NDUFAF6Q330K2 333 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 GLYR1Q49A26 553 aaPredicted RBP13.7□□□□□ -0.22
PDE6D-201ENST00000287600 PAGE3Q5JUK9 113 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 CGB2Q6NT52 195 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 CBLN3Q6UW01 205 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 CHMP1BQ7LBR1 199 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 BIVMQ86UB2 503 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 TRNT1Q96Q11 434 aaKnown RBP13.7□□□□□ -0.22
PDE6D-201ENST00000287600 UCN2Q96RP3 112 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 PIGQQ9BRB3 760 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 ZNF385DQ9H6B1 395 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 POLE3Q9NRF9 147 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 BEX4Q9NWD9 120 aaPredicted RBP13.7□□□□□ -0.22
PDE6D-201ENST00000287600 SLAMF8Q9P0V8 285 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 ZNF337Q9Y3M9 751 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 ACANP16112 2415 aa13.7□□□□□ -0.22
PDE6D-201ENST00000287600 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 A0A087WZY1 265 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 A0A096LPI6 279 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 CENPVL1A0A0U1RR11 272 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 A0A1W2PP18 115 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 LINC01387J3KSC0 135 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 CLIC1O00299 241 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 KIAA0513O60268 411 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 SMNDC1O75940 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDE6D-201ENST00000287600 NUDT14O95848 222 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 NR2F1P10589 423 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 UBL4AP11441 157 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 CD53P19397 219 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 ADSLP30566 484 aaPredicted RBP13.69□□□□□ -0.22
PDE6D-201ENST00000287600 MAGEA8P43361 318 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 ZNF41P51814 821 aaPredicted RBP13.69□□□□□ -0.22
PDE6D-201ENST00000287600 CLDN18P56856 261 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 EEF1A1P68104 462 aaKnown RBP13.69□□□□□ -0.22
PDE6D-201ENST00000287600 MAPK14Q16539 360 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 EEF1A1P5Q5VTE0 462 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 FRRS1Q6ZNA5 592 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 HMGN2P46Q86SG4 172 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 UBQLNLQ8IYU4 475 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 ZNF619Q8N2I2 560 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 CNEP1R1Q8N9A8 125 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 C18orf12Q96KH6 178 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 KLHDC3Q9BQ90 382 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 SAP130Q9H0E3 1048 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 MED17Q9NVC6 651 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 NDRG3Q9UGV2 375 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
PDE6D-201ENST00000287600 FLNAP21333 2647 aaKnown RBP13.68□□□□□ -0.22
PDE6D-201ENST00000287600 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.68□□□□□ -0.22
PDE6D-201ENST00000287600 A0A1W2PNV4 684 aa13.68□□□□□ -0.22
PDE6D-201ENST00000287600 A0A1W2PPR1 153 aa13.68□□□□□ -0.22
PDE6D-201ENST00000287600 A8MXE2 369 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms